RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CHSY3Q70JA7 882 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 CXXC5Q7LFL8 322 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 MAATS1Q7Z4T9 603 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 PRIMA1Q86XR5 153 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 SCUBE1Q8IWY4 988 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 LMNTD2Q8IXW0 634 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 CA13Q8N1Q1 262 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 TXLNBQ8N3L3 684 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 TMEM132CQ8N3T6 1108 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 RELL2Q8NC24 303 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 LRRN4CLQ8ND94 238 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 C1orf54Q8WWF1 131 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 SNF8Q96H20 258 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 PLEKHF2Q9H8W4 249 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 FBXO6Q9NRD1 293 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF629Q9UEG4 869 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 TRMT6Q9UJA5 497 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 ADAMTS6Q9UKP5 1117 aa10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 MRPS33Q9Y291 106 aaKnown RBP10.61□□□□□ -0.71
TRAPPC9-203ENST00000517667 MAGEB16A2A368 324 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 G3V3Y1 287 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 PRKNO60260 465 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CELA3AP09093 270 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 AP1S2P56377 157 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 SORDQ00796 357 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 DHX9Q08211 1270 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 FOXO1Q12778 655 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 TBL3Q12788 808 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 SLC13A2Q13183 592 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 DHX34Q14147 1143 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CSHL1Q14406 222 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 ELAVL1Q15717 326 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF750Q32MQ0 723 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 DUPD1Q68J44 220 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CASC4Q6P4E1 433 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF549Q6P9A3 640 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 OPN5Q6U736 354 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 KIAA1328Q86T90 577 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 DENND6AQ8IWF6 608 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 MYO1HQ8N1T3 1032 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CALML6Q8TD86 181 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 SLC5A11Q8WWX8 675 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 ATL1Q8WXF7 558 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 NANOS1Q8WY41 292 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 DAZLQ92904 295 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 FAR2Q96K12 515 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 SCYL1Q96KG9 808 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CNPPD1Q9BV87 410 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 NPLQ9BXD5 320 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 PRTFDC1Q9NRG1 225 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 REXO2Q9Y3B8 237 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 MAD1L1Q9Y6D9 718 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 CLCA3PQ9Y6N3 262 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 ATRQ13535 2644 aa10.6□□□□□ -0.71
TRAPPC9-203ENST00000517667 MXRA5Q9NR99 2828 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 A0A088AWK7 358 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 CLCA1A8K7I4 914 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 WWP2O00308 870 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 LY6G6DO95868 133 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SERPINA6P08185 405 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SMIM10L1P0DMW3 83 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF10P21506 573 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 HNF4AP41235 474 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SLC1A2P43004 574 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 DNASE1L1P49184 302 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 HK2P52789 917 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 STXBP1P61764 594 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 BMPR2Q13873 1038 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SF3B4Q15427 424 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 DRICH1Q6PGQ1 229 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 C16orf47Q6ZP98 133 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 GSTA5Q7RTV2 222 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 LACC1Q8IV20 430 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF595Q8IYB9 648 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 ULK2Q8IYT8 1036 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 MORN4Q8NDC4 146 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SIMC1Q8NDZ2 872 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 OR5L2Q8NGL0 311 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 OR8K3Q8NH51 312 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 OR56A3Q8NH54 315 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 EEF1AKMT1Q8WVE0 214 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 ZNF669Q96BR6 464 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 PYCR2Q96C36 320 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SMIM10Q96HG1 83 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 COX4I2Q96KJ9 171 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 YIPF4Q9BSR8 244 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 LIN28AQ9H9Z2 209 aaKnown RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 ARL15Q9NXU5 204 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 TUBA8Q9NY65 449 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 SPRR3Q9UBC9 169 aa10.59□□□□□ -0.71
TRAPPC9-203ENST00000517667 IL2RAP01589 272 aa10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 CD53P19397 219 aa10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 ENDOUP21128 410 aaKnown RBP10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 PPP2R1BP30154 601 aa10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 CEACAM8P31997 349 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 TIMP3P35625 211 aa10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 RAB38P57729 211 aa10.58□□□□□ -0.72
TRAPPC9-203ENST00000517667 PPP2R2BQ00005 443 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms