RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LCE2CQ5TA81 110 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF772Q68DY9 489 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TTC27Q6P3X3 843 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 C6orf89Q6UWU4 347 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SCARA5Q6ZMJ2 495 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 Q6ZPB1 254 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF367Q7RTV3 350 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 VTCN1Q7Z7D3 282 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 FAM124AQ86V42 546 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 KRT222Q8N1A0 295 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SLC25A41Q8N5S1 370 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PCDH20Q8N6Y1 951 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR4L1Q8NH43 312 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR52I2Q8NH67 350 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SLC25A43Q8WUT9 341 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPRYD4Q8WW59 207 aaPredicted RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PIGCQ92535 297 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SEPT8Q92599 483 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RND1Q92730 232 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HIST1H2ACQ93077 130 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TAAR8Q969N4 342 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SGK3Q96BR1 496 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF333Q96JL9 665 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 DEFB118Q96PH6 123 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 TESK2Q96S53 571 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 KRT12Q99456 494 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 NDNQ99608 321 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CENPKQ9BS16 269 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 HAUS8Q9BT25 410 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 RBM24Q9BX46 236 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 FBXO44Q9H4M3 255 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ACTL8Q9H568 366 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 DCTPP1Q9H773 170 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF160Q9HCG1 818 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PNRC2Q9NPJ4 139 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 NUDT15Q9NV35 164 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CHMP5Q9NZZ3 219 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 STX18Q9P2W9 335 aaKnown RBP3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 LRWD1Q9UFC0 647 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 FBXL2Q9UKC9 423 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 ST3GAL5Q9UNP4 418 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PIGLQ9Y2B2 252 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 NSG2Q9Y328 171 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 SH3TC1Q8TE82 1336 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 PCDH11YQ9BZA8 1340 aa3.68□□□□□ -1.82
RNU4-60P-201ENST00000517239 CARMIL1Q5VZK9 1371 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ANTXRLA6NF34 631 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 C17orf105B2RV13 164 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 UBE2Q2LH0YL09 131 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 WWP2O00308 870 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TRDMT1O14717 391 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 MATN3O15232 486 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 MPPED1O15442 326 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TIMM8AO60220 97 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 NIPSNAP2O75323 286 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 UPK3AO75631 287 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 KRT36O76013 467 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PLAUP00749 431 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 KRT6AP02538 564 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 APRTP07741 180 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 LYNP07948 512 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SERPINF2P08697 491 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ANXA4P09525 319 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ELFN1P0C7U0 828 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PRPS2P11908 318 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ACO1P21399 889 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TACR3P29371 465 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SRD5A2P31213 254 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 FOLR3P41439 243 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CSNK1EP49674 416 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TPMTP51580 245 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 RAD23BP54727 409 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CDH12P55289 794 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CLDN20P56880 219 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SELENOVP59797 346 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 YWHAEP62258 255 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PNRC1Q12796 327 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ASPHQ12797 758 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DOC2BQ14184 412 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMEM132DQ14C87 1099 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPHARQ15513 63 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CA9Q16790 459 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 BEAN1Q3B7T3 259 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DCAF4L1Q3SXM0 396 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 UGT3A2Q3SY77 523 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PPP6R3Q5H9R7 873 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 AARS2Q5JTZ9 985 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 LIPJQ5W064 366 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 FAM109BQ6ICB4 259 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CAPN13Q6MZZ7 669 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMEM53Q6P2H8 277 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 RNASEKQ6P5S7 137 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMEM71Q6P5X7 295 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TTC23LQ6PF05 361 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 KCTD18Q6PI47 426 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 GPR141Q7Z602 305 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF761Q86XN6 746 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms