RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 CHERPQ8IWX8 916 aaKnown RBP16.49■□□□□ 0.23
SFXN1-212ENST00000515791 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 NOA1Q8NC60 698 aaKnown RBP16.49■□□□□ 0.23
SFXN1-212ENST00000515791 ARMC2Q8NEN0 867 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 OR7G3Q8NG95 312 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 ADAMTS18Q8TE60 1221 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 ACSS3Q9H6R3 686 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 ZNF835Q9Y2P0 537 aa16.49■□□□□ 0.23
SFXN1-212ENST00000515791 A0A087X1B8 175 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 A0A088AWK7 358 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 CCDC189A1A4V9 331 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 LRRC14BA6NHZ5 514 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 RTCAO00442 366 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 NME2P1O60361 137 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 CTNSO60931 367 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 KLHL2O95198 593 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 S100BP04271 92 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 ZNF10P21506 573 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 NME2P22392 152 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 ATP5A1P25705 553 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 EEF1DP29692 281 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 HPDP32754 393 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 CA7P43166 264 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 MSH2P43246 934 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 MAGEA12P43365 314 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 HLCSP50747 726 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 CLCN2P51788 898 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 OC90Q02509 493 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 SETDB1Q15047 1291 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 ACAP2Q15057 778 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 WHAMMP3Q1A5X7 153 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 RNFT1Q5M7Z0 435 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 CCDC91Q7Z6B0 441 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 PLD6Q8N2A8 252 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 ACOT4Q8N9L9 421 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 TMEM178AQ8NBL3 297 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 THAP3Q8WTV1 239 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 PTPMT1Q8WUK0 201 aaPredicted RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 NCLNQ969V3 563 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 ISL2Q96A47 359 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 MRRFQ96E11 262 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 GPR137Q96N19 417 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 KCNC2Q96PR1 638 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 MAPKAP1Q9BPZ7 522 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 TBCDQ9BTW9 1192 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 DEFB126Q9BYW3 111 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 LYRM4Q9HD34 91 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 PNO1Q9NRX1 252 aaKnown RBP16.48■□□□□ 0.23
SFXN1-212ENST00000515791 OPTCQ9UBM4 332 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 VTI1BQ9UEU0 232 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 TSC22D4Q9Y3Q8 395 aa16.48■□□□□ 0.23
SFXN1-212ENST00000515791 A0A096LPK6 155 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 TRBV11-1A0A0K0K1C0 115 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 CLDN4O14493 209 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 SLC25A12O75746 678 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 TGFB1P01137 390 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 HIST1H1TP22492 207 aaPredicted RBP16.47■□□□□ 0.23
SFXN1-212ENST00000515791 CYB561P49447 251 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 PER3P56645 1201 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 SLC13A2Q13183 592 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 HIST2H2ACQ16777 129 aaPredicted RBP16.47■□□□□ 0.23
SFXN1-212ENST00000515791 TMEM35AQ53FP2 167 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 DEPDC1Q5TB30 811 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 HIST2H2AA3Q6FI13 130 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 GRHL2Q6ISB3 625 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 MED27Q6P2C8 311 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 CLNKQ7Z7G1 428 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 HORMAD2Q8N7B1 307 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 VMP1Q96GC9 406 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 CDC42EP4Q9H3Q1 356 aaKnown RBP16.47■□□□□ 0.23
SFXN1-212ENST00000515791 ADAP2Q9NPF8 381 aa16.47■□□□□ 0.23
SFXN1-212ENST00000515791 MYOCOSA0A1B0GUC4 107 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 EPB42P16452 691 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 PCBP2Q15366 365 aaKnown RBP eCLIP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ELAVL1Q15717 326 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 FAM83EQ2M2I3 478 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 TECRLQ5HYJ1 363 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 KHDRBS2Q5VWX1 349 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 C16orf47Q6ZP98 133 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 Q6ZPB1 254 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 CPSF7Q8N684 471 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 TEX9Q8N6V9 391 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 SRFBP1Q8NEF9 429 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 HUS1BQ8NHY5 278 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 SLC44A1Q8WWI5 657 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ITLN2Q8WWU7 325 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 UBE2E3Q969T4 207 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ANKRD9Q96BM1 317 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 CCDC120Q96HB5 630 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 SORBS1Q9BX66 1292 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ZNF717Q9BY31 904 aaPredicted RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ALOXE3Q9BYJ1 711 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 OR51B5Q9H339 312 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 ZNF358Q9NW07 568 aa16.46■□□□□ 0.23
SFXN1-212ENST00000515791 MRPS33Q9Y291 106 aaKnown RBP16.46■□□□□ 0.23
SFXN1-212ENST00000515791 CSMD1Q96PZ7 3565 aa16.46■□□□□ 0.22
SFXN1-212ENST00000515791 MYO7BQ6PIF6 2116 aa16.45■□□□□ 0.22
SFXN1-212ENST00000515791 TRGV8A0A0C4DH27 118 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms