RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MRPL9Q9BYD2 267 aaKnown RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 NAPBQ9H115 298 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 MID1IP1Q9NPA3 183 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 FAM212BQ9NTI7 297 aaPredicted RBP4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF319Q9P2F9 582 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 ZHX2Q9Y6X8 837 aa4.24□□□□□ -1.73
HMGCS1-207ENST00000514610 IGHV3OR16-10A0A075B7F0 116 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 IGHV4-30-2A0A087WSY4 118 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 A0A1B0GU03 582 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 TCP10L2B9ZVM9 353 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 CACNB4O00305 520 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 CHRNGP07510 517 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 TRIM49P0CI25 452 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 TRIM49CP0CI26 452 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 CPA3P15088 417 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 B4GALT1P15291 398 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 EZRP15311 586 aaKnown RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 VEGFCP49767 419 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 TEFQ10587 303 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 GK2Q14410 553 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 MLF2Q15773 248 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 UPP1Q16831 310 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 HFEQ30201 348 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 NEPROQ6NW34 567 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 FAAP20Q6NZ36 180 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 CYP4V2Q6ZWL3 525 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 KCNMB4Q86W47 210 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 CNTN4Q8IWV2 1026 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF440Q8IYI8 595 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 ELMOD1Q8N336 334 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 SPC24Q8NBT2 197 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 MSANTD4Q8NCY6 345 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 SSC4DQ8WTU2 575 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 LIPHQ8WWY8 451 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 HAS2Q92819 552 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 SNX21Q969T3 373 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF274Q96GC6 653 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 C5orf30Q96GV9 206 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 LRRC61Q9BV99 259 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 NUSAP1Q9BXS6 441 aaKnown RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 RSPH9Q9H1X1 276 aaPredicted RBP4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 VIPAS39Q9H9C1 493 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 S100A14Q9HCY8 104 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 UBQLN2Q9UHD9 624 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 KCNK6Q9Y257 313 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 OR1A2Q9Y585 309 aa4.23□□□□□ -1.73
HMGCS1-207ENST00000514610 PSMD3O43242 534 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF749O43361 778 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 SERPINB2P05120 415 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 THEGLP0DJG4 465 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 LCP2Q13094 533 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 RPA4Q13156 261 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 PPP2R5CQ13362 524 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 MSLNQ13421 630 aaPredicted RBP4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 ENPP2Q13822 863 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 GCKRQ14397 625 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 CAPN13Q6MZZ7 669 aaPredicted RBP4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 CARM1Q86X55 608 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 WDR49Q8IV35 697 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 OR4N5Q8IXE1 308 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 ZNF444Q8N0Y2 327 aaPredicted RBP4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 PRCCQ92733 491 aaPredicted RBP4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 GUCD1Q96NT3 240 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 SSX3Q99909 188 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 PINK1Q9BXM7 581 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 TRIM15Q9C019 465 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 MAD2L2Q9UI95 211 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 FOXA2Q9Y261 457 aaPredicted RBP4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 EXOC6BQ9Y2D4 811 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 PRSS21Q9Y6M0 314 aa4.22□□□□□ -1.73
HMGCS1-207ENST00000514610 E9PQ18 207 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 EPOP01588 193 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 ANPEPP15144 967 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 PKLRP30613 574 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 FHITP49789 147 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 CCR4P51679 360 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 ERVK-16P61578 105 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 FKBP3Q00688 224 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 MFGE8Q08431 387 aaPredicted RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 ELAVL2Q12926 359 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 GIT2Q14161 759 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF146Q15072 292 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 KNOP1Q1ED39 458 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 C2orf76Q3KRA6 126 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 GLIPR1L2Q4G1C9 344 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 TEX35Q5T0J7 233 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 SNRNP48Q6IEG0 339 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 ZNF343Q6P1L6 599 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 FAM131BQ86XD5 332 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 STHQ8IWL8 128 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 CCDC197Q8NCU1 140 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 LRRC15Q8TF66 581 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 CHPT1Q8WUD6 406 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 RBM4BQ9BQ04 359 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 TRIM51Q9BSJ1 452 aa4.21□□□□□ -1.74
HMGCS1-207ENST00000514610 KCNK13Q9HB14 408 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms