RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 HNMTP50135 292 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CCR4P51679 360 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ARFIP1P53367 373 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 LINC00205P59089 165 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 HMGN5P82970 282 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 HSF2Q03933 536 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CNTN1Q12860 1018 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 KEAP1Q14145 624 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 BTG3Q14201 252 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 P2RY6Q15077 328 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 DUSP5Q16690 384 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 MPPE1Q53F39 396 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 WDR38Q5JTN6 314 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 NADSYN1Q6IA69 706 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 RFPL4BQ6ZWI9 263 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 TRMT1LQ7Z2T5 733 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 MISPQ8IVT2 679 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CERS5Q8N5B7 392 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 BCORP1Q8N888 145 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 POC1AQ8NBT0 407 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 GPRC5AQ8NFJ5 357 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 OR4C3Q8NH37 302 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 OR1L3Q8NH93 324 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF606Q8WXB4 792 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 MARK4Q96L34 752 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 PCDHB18PQ96TA0 734 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 IL12RB2Q99665 862 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CBWD1Q9BRT8 395 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZPBPQ9BS86 351 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF416Q9BWM5 594 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 NT5C3AQ9H0P0 336 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 CD93Q9NPY3 652 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 INTS9Q9NV88 658 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 VPS54Q9P1Q0 977 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 LAMP5Q9UJQ1 280 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 RABL2BQ9UNT1 228 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 OR1A2Q9Y585 309 aa4.45□□□□□ -1.7
CALCOCO2-222ENST00000514006 SPATA31D1Q6ZQQ2 1576 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 KIAA1210Q9ULL0 1709 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 NPC1L1Q9UHC9 1359 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 A0A087WZ39 114 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 FAM230AA0A1W2PPH8 454 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 H0YCG3 227 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 KLF11O14901 512 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 MCF2LO15068 1137 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 CHADO15335 359 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ECE2O60344 883 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 CIDEAO60543 219 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 VPS26AO75436 327 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 TXNDC12O95881 172 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PCCBP05166 539 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 GPIP06744 558 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 HIST1H2AGP0C0S8 130 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZCCHC18P0CG32 403 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 CALCBP10092 127 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 SLC2A2P11168 524 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PRG2P13727 222 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 DCTP40126 519 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 HSPA14Q0VDF9 509 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 NME3Q13232 169 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 EXOSC7Q15024 291 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZNF74Q16587 644 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 IZUMO4Q1ZYL8 232 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 AGKQ53H12 422 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PLPP4Q5VZY2 271 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 AWAT2Q6E213 333 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 RTL6Q6ICC9 239 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 RGS9BPQ6ZS82 235 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ZER1Q7Z7L7 766 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 YRDCQ86U90 279 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 MARVELD2Q8N4S9 558 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 NIPA2Q8N8Q9 360 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 BANPQ8N9N5 519 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 CD99L2Q8TCZ2 262 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 APOBEC4Q8WW27 367 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 HPSE2Q8WWQ2 592 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 FCAMRQ8WWV6 532 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 SMPDL3AQ92484 453 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PHYHIPQ92561 330 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 HIST1H2ACQ93077 130 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PIGQQ9BRB3 760 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ERP44Q9BS26 406 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 FICDQ9BVA6 458 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 SLC26A1Q9H2B4 701 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 S100A14Q9HCY8 104 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PALMDQ9NP74 551 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 YAE1D1Q9NRH1 226 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ERVK-18Q9QC07 812 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 EPHA6Q9UF33 1036 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 PPP2R2CQ9Y2T4 447 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 ABCC4O15439 1325 aa4.44□□□□□ -1.7
CALCOCO2-222ENST00000514006 RAD54L2Q9Y4B4 1467 aa4.43□□□□□ -1.7
CALCOCO2-222ENST00000514006 GPR89AB7ZAQ6 455 aa4.43□□□□□ -1.7
CALCOCO2-222ENST00000514006 E2F3O00716 465 aa4.43□□□□□ -1.7
CALCOCO2-222ENST00000514006 IKBKBO14920 756 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms