RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ZNF793Q6ZN11 406 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
DDX41-210ENST00000509576 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 TMEM156Q8N614 296 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 TRPV3Q8NET8 790 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 ESAMQ96AP7 390 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 RHBDF1Q96CC6 855 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 SCYL1Q96KG9 808 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 HIST1H2AHQ96KK5 128 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 CAPZA3Q96KX2 299 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 HIST1H2AJQ99878 128 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 AIF1LQ9BQI0 150 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 H2AFJQ9BTM1 129 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 CNPPD1Q9BV87 410 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 TMUB1Q9BVT8 246 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
DDX41-210ENST00000509576 CLK4Q9HAZ1 481 aaKnown RBP12.4□□□□□ -0.42
DDX41-210ENST00000509576 PRTFDC1Q9NRG1 225 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 SMYD2Q9NRG4 433 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
DDX41-210ENST00000509576 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
DDX41-210ENST00000509576 ERI3O43414 337 aaKnown RBP12.39□□□□□ -0.43
DDX41-210ENST00000509576 KLK8O60259 260 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 IGHG3P01860 377 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 C1GALT1C1LP0DN25 315 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 GLI4P10075 376 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 CCL3P10147 92 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 MAGEA5P43359 124 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 FNTAP49354 379 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 ART1P52961 327 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 IST1P53990 364 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 LIM2P55344 173 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
DDX41-210ENST00000509576 KRTAP21-3Q3LHN1 58 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 FAM45BPQ6NSW5 357 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 ARHGAP11AQ6P4F7 1023 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 DGAT2L6Q6ZPD8 337 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 SEM1Q6ZVN7 128 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 SPATA6LQ8N4H0 392 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 FAM45AQ8TCE6 357 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 ACTRT1Q8TDG2 376 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 RND1Q92730 232 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 PBKQ96KB5 322 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 TTYH2Q9BSA4 534 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 PROK2Q9HC23 129 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 ZNF358Q9NW07 568 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 SPRR3Q9UBC9 169 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 MYOTQ9UBF9 498 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 Q9UFV3 132 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 YARS2Q9Y2Z4 477 aaKnown RBP12.39□□□□□ -0.43
DDX41-210ENST00000509576 L3MBTL1Q9Y468 752 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
DDX41-210ENST00000509576 HRKO00198 91 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 PSMD12O00232 456 aaPredicted RBP12.38□□□□□ -0.43
DDX41-210ENST00000509576 LDB3O75112 727 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 WDR47O94967 919 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 NADKO95544 446 aaPredicted RBP12.38□□□□□ -0.43
DDX41-210ENST00000509576 ETHE1O95571 254 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 TTC4O95801 387 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 TUBB4AP04350 444 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 RFPL3SP0C7P2 107 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 PLA2G16P53816 162 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 HSD17B7P56937 341 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 CDKL1Q00532 357 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 ID2Q02363 134 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 SLC35F6Q8N357 371 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 DOK4Q8TEW6 326 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 ASB5Q8WWX0 329 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 SLCO2A1Q92959 643 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 SH2D2AQ9NP31 389 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 ADAP2Q9NPF8 381 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 TUBA8Q9NY65 449 aaPredicted RBP12.38□□□□□ -0.43
DDX41-210ENST00000509576 DAPP1Q9UN19 280 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 DYRK1BQ9Y463 629 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
DDX41-210ENST00000509576 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 FAM95CA0A1B0GW59 222 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 A8MVJ9 347 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 RTCAO00442 366 aaKnown RBP12.37□□□□□ -0.43
DDX41-210ENST00000509576 FANCGO15287 622 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 ZFAND5O76080 213 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 SAT1P21673 171 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 KCNC1P48547 511 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 SLC13A2Q13183 592 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 ELAVL1Q15717 326 aaKnown RBP12.37□□□□□ -0.43
DDX41-210ENST00000509576 TMEM211Q6ICI0 200 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 NIPAL1Q6NVV3 410 aa12.37□□□□□ -0.43
DDX41-210ENST00000509576 TMIGD1Q6UXZ0 262 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms