RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SOX3P41225 446 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SCTRP47872 440 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 DCAF7P61962 342 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 BASP1P80723 227 aaKnown RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 HYAL2Q12891 473 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SP140Q13342 867 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CTBP1Q13363 440 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SNX1Q13596 522 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 HECTD2Q5U5R9 776 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 MBOAT1Q6ZNC8 495 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 C16orf47Q6ZP98 133 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 RTL4Q6ZR62 310 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CHSY3Q70JA7 882 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SLC13A5Q86YT5 568 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SPNS2Q8IVW8 549 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CA13Q8N1Q1 262 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CIARTQ8N365 385 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 C17orf53Q8N3J3 647 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 TRPV3Q8NET8 790 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 OR56A3Q8NH54 315 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 C1orf54Q8WWF1 131 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SNF8Q96H20 258 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CNPPD1Q9BV87 410 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 LDAHQ9H6V9 325 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 ADAP2Q9NPF8 381 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 PNO1Q9NRX1 252 aaKnown RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 BEX4Q9NWD9 120 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-211ENST00000508546 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 CLDN16Q9Y5I7 305 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 DSCAMO60469 2012 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 HEATR5AQ86XA9 2040 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 MED12LQ86YW9 2145 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TRGV5A0A0B4J1U4 118 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TUBAL3A6NHL2 446 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 G3V3Y1 287 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 CELA3AP09093 270 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 CD53P19397 219 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TPSB2P20231 275 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TACR1P25103 407 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 CEACAM8P31997 349 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 RGS4P49798 205 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 HK2P52789 917 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 HSD17B7P56937 341 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 RAB8AP61006 207 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 NKX6-1P78426 367 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 PPP2R2BQ00005 443 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TPSAB1Q15661 275 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ELAVL1Q15717 326 aaKnown RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF750Q32MQ0 723 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SEL1L2Q5TEA6 688 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 FBXW10Q5XX13 1052 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 DUPD1Q68J44 220 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 UGT3A1Q6NUS8 523 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 DRICH1Q6PGQ1 229 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 FAM47EQ6ZV65 393 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 KIF18BQ86Y91 864 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 DENND6AQ8IWF6 608 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 PALM2Q8IXS6 379 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TMEM132CQ8N3T6 1108 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 FBXW8Q8N3Y1 598 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 GPATCH11Q8N954 259 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ANKRD53Q8N9V6 530 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ALKBH8Q96BT7 664 aaKnown RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SCYL1Q96KG9 808 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 OR4K3Q96R72 315 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 NPLQ9BXD5 320 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SPNS1Q9H2V7 528 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 RHBGQ9H310 441 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 FBXO6Q9NRD1 293 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SACM1LQ9NTJ5 587 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 SPRR3Q9UBC9 169 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF629Q9UEG4 869 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 MTRF1LQ9UGC7 380 aaKnown RBP8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ATG4BQ9Y4P1 393 aa8.68□□□□□ -1.02
NEDD9-211ENST00000508546 ATP6AP2A0A1C7CYW4 349 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 MAGEB16A2A368 324 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 TGFBR3LH3BV60 316 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 WWP2O00308 870 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 CLDN4O14493 209 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 ARHGEF9O43307 516 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 ATP6AP2O75787 350 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 EPPINO95925 133 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 P04436 131 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 SERPINA6P08185 405 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 F7P08709 466 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HIST1H2AGP0C0S8 130 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HIST1H2ADP20671 130 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 BMP5P22003 454 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 PPP2R1BP30154 601 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 TIMP3P35625 211 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HNF4AP41235 474 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 DNASE1L1P49184 302 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 AP1S2P56377 157 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 REEP5Q00765 189 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 SORDQ00796 357 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 THOC5Q13769 683 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms