RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RASL10BQ96S79 203 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 UBAC1Q9BSL1 405 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 THUMPD2Q9BTF0 503 aaKnown RBP3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 CARD6Q9BX69 1037 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 MTMR12Q9C0I1 747 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 FAM49AQ9H0Q0 323 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 ARRDC1-AS1Q9H2J1 176 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 TMEM245Q9H330 911 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 Q9H8V8 135 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 PNPLA3Q9NST1 481 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 ANKMY1Q9P2S6 941 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 C19orf25Q9UFG5 118 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 TBK1Q9UHD2 729 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 STUB1Q9UNE7 303 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 EXOC7Q9UPT5 735 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 FOXA2Q9Y261 457 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 SH3GLB1Q9Y371 365 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 IKBKGQ9Y6K9 419 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 PFASO15067 1338 aa3.61□□□□□ -1.83
TRAPPC13-209ENST00000508304 PCNX3Q9H6A9 2034 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TMEM129A0AVI4 362 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 NXPH2O95156 264 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR6A2O95222 327 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 PTBP3O95758 552 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CHRNGP07510 517 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSPY4P0CV99 314 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSPY10P0CW01 314 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ACADSP16219 412 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 LHCGRP22888 699 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CCND2P30279 289 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ALDH1B1P30837 517 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 MAGEA4P43358 317 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 NKX2-1P43699 371 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR3A1P47881 315 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 IFNAR2P48551 515 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CNN1P51911 297 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FKBP1BP68106 108 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 DPYSQ14117 519 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FGD3Q5JSP0 725 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 SLC35D3Q5M8T2 416 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 UGT3A1Q6NUS8 523 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZCCHC12Q6PEW1 402 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 GPR141Q7Z602 305 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 LAX1Q8IWV1 398 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FBXW8Q8N3Y1 598 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 LINC00612Q8N6U2 182 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF540Q8NDQ6 660 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR10Q1Q8NGQ4 319 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR13C3Q8NGS6 347 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR2T11Q8NH01 316 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR4A16Q8NH70 328 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 PHLDA1Q8WV24 401 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 DYRK2Q92630 601 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 THRSPQ92748 146 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 HAS2Q92819 552 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRIM44Q96DX7 344 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 EPSTI1Q96J88 318 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 BTBD9Q96Q07 612 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CCDC3Q9BQI4 270 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FUCA2Q9BTY2 467 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CLEC7AQ9BXN2 247 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 LRRC2Q9BYS8 371 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSPYL1Q9H0U9 437 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 ATG10Q9H0Y0 220 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CARD9Q9H257 536 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 MTIF3Q9H2K0 278 aaKnown RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 RIBC2Q9H4K1 309 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TLE6Q9H808 572 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 PHPT1Q9NRX4 125 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FGF21Q9NSA1 209 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 SOHLH2Q9NX45 425 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 COPS7AQ9UBW8 275 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 FAM153AQ9UHL3 310 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TEKT2Q9UIF3 430 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 DNPEPQ9ULA0 475 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 TNNQ9UQP3 1299 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 RIPK3Q9Y572 518 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 KLK4Q9Y5K2 254 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 R4GN57 208 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 IL16Q14005 1332 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 HEG1Q9ULI3 1381 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 KIAA1217Q5T5P2 1943 aa3.6□□□□□ -1.83
TRAPPC13-209ENST00000508304 CCDC162PA2VCL2 907 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ANKDD1BA6NHY2 528 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 H0YIG0 161 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SLC28A1O00337 649 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 EEF2KO00418 725 aaKnown RBP3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ACSL4O60488 711 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 DIRAS3O95661 229 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 IGHDP01880 384 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 SFTPBP07988 381 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 NCF1P14598 390 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 CA4P22748 312 aa3.59□□□□□ -1.83
TRAPPC13-209ENST00000508304 ACP1P24666 158 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms