RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FBXW8Q8N3Y1 598 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 PRSS33Q8NF86 280 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 NUP37Q8NFH4 326 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 OR4A16Q8NH70 328 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 C8orf46Q8TAG6 207 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 HCAR2Q8TDS4 363 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 UBTD2Q8WUN7 234 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 PRCCQ92733 491 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 C11orf52Q96A22 123 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 MRPL53Q96EL3 112 aaKnown RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 ATXN7L3BQ96GX2 97 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 GAL3ST4Q96RP7 486 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 OPRPNQ99935 248 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 THAP9Q9H5L6 903 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 IL1RAPQ9NPH3 570 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 ZCCHC3Q9NUD5 404 aaKnown RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 COMMD8Q9NX08 183 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 ZNF319Q9P2F9 582 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 THAP10Q9P2Z0 257 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 KLK11Q9UBX7 282 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 TRMT6Q9UJA5 497 aaKnown RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 MRPS18CQ9Y3D5 142 aaKnown RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 RNF123Q5XPI4 1314 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 ABCC9O60706 1549 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 KIAA1217Q5T5P2 1943 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 IGLV7-46A0A075B6I9 117 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 SH3PXD2BA1X283 911 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 SHISA7A6NL88 538 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 EPM2AB3EWF7 344 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 SLC28A1O00337 649 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZBTB14O43829 449 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 MMP10P09238 476 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 EZRP15311 586 aaKnown RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 GPX3P22352 226 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 NT5C2P49902 561 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 HUNKP57058 714 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 IRX1P78414 480 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 ARF5P84085 180 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PMP22Q01453 160 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 GFPT1Q06210 699 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF177Q13360 481 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 LY6DQ14210 128 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 MEF2DQ14814 521 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PKN2Q16513 984 aaKnown RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 WSCD2Q2TBF2 565 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 MOGAT2Q3SYC2 334 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 OTUD3Q5T2D3 398 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF613Q6PF04 617 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 B3GLCTQ6Y288 498 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 C3P1Q6ZMU1 363 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF497Q6ZNH5 498 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 GDPGP1Q6ZNW5 385 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 RFPL4BQ6ZWI9 263 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 OR4N5Q8IXE1 308 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF444Q8N0Y2 327 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 OR52E1Q8NGJ3 308 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PSMA8Q8TAA3 256 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 URGCPQ8TCY9 931 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 LIPHQ8WWY8 451 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 ZNF560Q96MR9 790 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PRICKLE1Q96MT3 831 aaPredicted RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 S1PR3Q99500 378 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 SYT11Q9BT88 431 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 FGFBP2Q9BYJ0 223 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 CARD9Q9H257 536 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 CXXC4Q9H2H0 198 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PARLQ9H300 379 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 VIPAS39Q9H9C1 493 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 S100A14Q9HCY8 104 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 B3GAT2Q9NPZ5 323 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 PLEK2Q9NYT0 353 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 TECRQ9NZ01 308 aaKnown RBP2.88□□□□□ -1.95
LSM6-205ENST00000507449 NLGN3Q9NZ94 848 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 HMG20BQ9P0W2 317 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 THEGQ9P2T0 379 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 UBQLN2Q9UHD9 624 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 BAIAP2L1Q9UHR4 511 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 EXOC7Q9UPT5 735 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 SH3GLB1Q9Y371 365 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 UMODL1Q5DID0 1318 aa2.88□□□□□ -1.95
LSM6-205ENST00000507449 LOC105371242A0A075B767 164 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 SOCS3O14543 225 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 ARHGEF9O43307 516 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 TNFSF12O43508 249 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 SNAP91O60641 907 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 TXNDC12O95881 172 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 GAS8O95995 478 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 AOC1P19801 751 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 FHITP49789 147 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 CNN1P51911 297 aaKnown RBP2.87□□□□□ -1.95
LSM6-205ENST00000507449 NDST2P52849 883 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 SLC12A3P55017 1021 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 CASP9P55211 416 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 STARD6P59095 220 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 ABCE1P61221 599 aaKnown RBP2.87□□□□□ -1.95
LSM6-205ENST00000507449 NFATC2Q13469 925 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 HEPACAMQ14CZ8 416 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 OR1C1Q15619 314 aa2.87□□□□□ -1.95
LSM6-205ENST00000507449 FASTKD1Q53R41 847 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms