RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PCDHGA9Q9Y5G4 932 aaKnown RBP7.99□□□□□ -1.13
PDGFC-205ENST00000506880 ASPMQ8IZT6 3477 aa7.99□□□□□ -1.13
PDGFC-205ENST00000506880 DSPP15924 2871 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 IGKV3D-11A0A0A0MRZ8 115 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 A0A0A6YYC8 382 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 LRRC14BA6NHZ5 514 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TTC36A6NLP5 189 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 IDSB3KWA1 339 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 I3L1I5 382 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CYR61O00622 381 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 UBFD1O14562 309 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 HDAC3O15379 428 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PROM1O43490 865 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CHST10O43529 356 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 SASH3O75995 380 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 HPP00738 406 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TGFB1P01137 390 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 HEXBP07686 556 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PRPS2P11908 318 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 COX7A2P14406 83 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CREB1P16220 341 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 IL1RNP18510 177 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TIA1P31483 386 aaKnown RBP eCLIP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MRPL19P49406 292 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MAPK12P53778 367 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 EMP2P54851 167 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 LIM2P55344 173 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 BTN3A2P78410 334 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 OCRLQ01968 901 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TNFRSF17Q02223 184 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF763Q0D2J5 394 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TBL3Q12788 808 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CDC20Q12834 499 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 AIMP2Q13155 320 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MPP2Q14168 576 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 UGT3A2Q3SY77 523 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ATP6AP1LQ52LC2 224 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TTMPQ5BVD1 217 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 SH2D4BQ5SQS7 431 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CPZQ66K79 652 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 OR52E8Q6IFG1 317 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 NDUFAF7Q7L592 441 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 GPR155Q7Z3F1 870 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 COMMD6Q7Z4G1 85 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 R3HCC1LQ7Z5L2 792 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CRLF3Q8IUI8 442 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PLD3Q8IV08 490 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZC3H7AQ8IWR0 971 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 SCUBE1Q8IWY4 988 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CA13Q8N1Q1 262 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TMEM132CQ8N3T6 1108 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 OR9A4Q8NGU2 314 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 OR8K3Q8NH51 312 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 TWIST2Q8WVJ9 160 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 APOBEC4Q8WW27 367 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 DYDC1Q8WWB3 177 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CKAP2Q8WWK9 683 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF75CPQ92670 426 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 DAZLQ92904 295 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PMEPA1Q969W9 287 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ARL8AQ96BM9 186 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 F2RL3Q96RI0 385 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 CRB3Q9BUF7 120 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF717Q9BY31 904 aaPredicted RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ACPTQ9BZG2 426 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PRORYQ9H606 182 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 OCEL1Q9H607 264 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MEAF6Q9HAF1 191 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MYNNQ9NPC7 610 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ADAP2Q9NPF8 381 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 SLC22A11Q9NSA0 550 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 KCMF1Q9P0J7 381 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 C5AR2Q9P296 337 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 C3orf18Q9UK00 162 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 ZMIZ1Q9ULJ6 1067 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 SLC12A4Q9UP95 1085 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 PTRH2Q9Y3E5 179 aaKnown RBP7.98□□□□□ -1.13
PDGFC-205ENST00000506880 DNAJC15Q9Y5T4 150 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 MED13Q9UHV7 2174 aa7.98□□□□□ -1.13
PDGFC-205ENST00000506880 GOLGA8QA0A0J9YX86 632 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 TCRBV16S1A1N1A0A5B0 115 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PMS2P1A4D2B8 440 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 GOLGA8OA6NCC3 632 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 SRRM3A6NNA2 597 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 GOLGA8NF8WBI6 632 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 NRP2O60462 931 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ALOX12BO75342 701 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 BCAS2O75934 225 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ALPPP05187 535 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 FAM58BPP0C7Q3 252 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 C8orf89P0DMQ9 161 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 NR2F6P10588 404 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ALOX15P16050 662 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PLA2G16P53816 162 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CYP4F2P78329 520 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 TXNL4AP83876 142 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PLIN5Q00G26 463 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 RHAGQ02094 409 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms