RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ACAP2Q15057 778 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 OR1C1Q15619 314 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 HIST2H2ACQ16777 129 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 FAM83EQ2M2I3 478 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 GLE1Q53GS7 698 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 HIST2H2AA3Q6FI13 130 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 GRHL2Q6ISB3 625 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF793Q6ZN11 406 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 RPS19BP1Q86WX3 136 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF227Q86WZ6 799 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CYP4X1Q8N118 509 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 OR7G3Q8NG95 312 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 UBE2E3Q969T4 207 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 KCNC2Q96PR1 638 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CSF3RQ99062 836 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 UTP23Q9BRU9 249 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 HES7Q9BYE0 225 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 CDCP1Q9H5V8 836 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 LYRM4Q9HD34 91 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 PRTFDC1Q9NRG1 225 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 OPTCQ9UBM4 332 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MTRF1LQ9UGC7 380 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 ZNF223Q9UK11 482 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 OSGIN2Q9Y236 505 aa8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 MRPS33Q9Y291 106 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-209ENST00000506632 SYNDIG1LA6NDD5 238 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 LRRC14BA6NHZ5 514 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 A8MUA0 341 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 CLDN4O14493 209 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 CTNSO60931 367 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 WISP2O76076 250 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TUBB4AP04350 444 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 EPB42P16452 691 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ATP5A1P25705 553 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TPP2P29144 1249 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TYK2P29597 1187 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PPP2R1BP30154 601 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PIK3CBP42338 1070 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 SERPINB8P50452 374 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ST13P50502 369 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ALDH18A1P54886 795 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 KCNK10P57789 538 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PMP22Q01453 160 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TGM3Q08188 693 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 RCN2Q14257 317 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PCBP2Q15366 365 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■■■■ 81.2
PDLIM5-209ENST00000506632 PFKFB4Q16877 469 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TMEM35AQ53FP2 167 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TECRLQ5HYJ1 363 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 DEPDC1Q5TB30 811 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 HIST2H2BCQ6DN03 193 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 SPINK14Q6IE38 97 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 METTL2BQ6P1Q9 378 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 MED27Q6P2C8 311 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 MAMDC2Q7Z304 686 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TEX9Q8N6V9 391 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ACOT4Q8N9L9 421 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 FAM47BQ8NA70 645 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 SRFBP1Q8NEF9 429 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 MNS1Q8NEH6 495 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 B3GNT7Q8NFL0 401 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 RELTQ969Z4 430 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 PAFAH2Q99487 392 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 FMO2Q99518 471 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 TBCDQ9BTW9 1192 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ROGDIQ9GZN7 287 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 COPS7BQ9H9Q2 264 aaPredicted RBP8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ADAP2Q9NPF8 381 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 ANKRD10Q9NXR5 420 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 CROCCQ5TZA2 2017 aa8.47□□□□□ -1.05
PDLIM5-209ENST00000506632 A1L4Q6 167 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 TMEM200CA6NKL6 621 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 H0YIV9 168 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 KIF2AO00139 706 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 RTCAO00442 366 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 LRRTM2O43300 516 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 NME2P1O60361 137 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 UGDHO60701 494 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 MYO1DO94832 1006 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ACSL3O95573 720 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 TGFB1P01137 390 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SP1P08047 785 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 CTAGE8P0CG41 777 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 GFAPP14136 432 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 NME2P22392 152 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 HIST1H1TP22492 207 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SERPINB9P50453 376 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 HLCSP50747 726 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 CLCN2P51788 898 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ARFIP1P53367 373 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 IGLV3-21P80748 117 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 SLC13A2Q13183 592 aa8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 ELAVL1Q15717 326 aaKnown RBP8.46□□□□□ -1.06
PDLIM5-209ENST00000506632 UAP1Q16222 522 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms