RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PRAMEF33A0A0G2JMD5 474 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 GOLGA8KD6RF30 607 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 MCIDASD6RGH6 385 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 NPIPA2E9PIF3 369 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 PRAMEF10O60809 474 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 GLRA3O75311 464 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 CPNE6O95741 557 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 C1RP00736 705 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 FCER2P06734 321 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 SRD5A1P18405 259 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 CDH6P55285 790 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 KPNB1Q14974 876 aaKnown RBP4.91□□□□□ -1.62
NIPBL-204ENST00000504430 CA9Q16790 459 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 PLAC9Q5JTB6 97 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 NSUN5P2Q63ZY6 315 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 ARHGAP22Q7Z5H3 698 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 LRRC56Q8IYG6 542 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-204ENST00000504430 MACROD1Q9BQ69 325 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 NLNQ9BYT8 704 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 GOLPH3Q9H4A6 298 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 Q9N2K0 584 aa4.91□□□□□ -1.62
NIPBL-204ENST00000504430 RCOR3Q9P2K3 495 aaPredicted RBP4.91□□□□□ -1.62
NIPBL-204ENST00000504430 E9PQ18 207 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 PRAMEF26H0Y7S4 382 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 PRAMEF11O60813 436 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 ENGP17813 658 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 SIRPAP78324 504 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 MAPRE2Q15555 327 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 SSX2Q16385 188 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 TCTN1Q2MV58 587 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 AGKQ53H12 422 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 CAPN13Q6MZZ7 669 aaPredicted RBP4.9□□□□□ -1.62
NIPBL-204ENST00000504430 Q6ZNB5 142 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 TRPM8Q7Z2W7 1104 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 CCDC190Q86UF4 302 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 KLBQ86Z14 1044 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 FAM47BQ8NA70 645 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 SLC7A8Q9UHI5 535 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 NOCTQ9UK39 431 aaKnown RBP4.9□□□□□ -1.62
NIPBL-204ENST00000504430 MEMO1Q9Y316 297 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 NFE2L3Q9Y4A8 694 aa4.9□□□□□ -1.62
NIPBL-204ENST00000504430 KDELR3O43731 214 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 TGFB1P01137 390 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 CD63P08962 238 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 CD3GP09693 182 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 FURINP09958 794 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 MX1P20591 662 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 UBA1P22314 1058 aaKnown RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 DCTDP32321 178 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 PLOD1Q02809 727 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 ARHGAP1Q07960 439 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 SREBF2Q12772 1141 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 ETFDHQ16134 617 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 XKR7Q5GH72 579 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 RD3Q7Z3Z2 195 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 DCXRQ7Z4W1 244 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 CLNKQ7Z7G1 428 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 DHDDSQ86SQ9 333 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 LSMEM2Q8N112 164 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 LCORLQ8N3X6 602 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 VANGL1Q8TAA9 524 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 ARNTL2Q8WYA1 636 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 GPA33Q99795 319 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 SSBP4Q9BWG4 385 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 RBM24Q9BX46 236 aaKnown RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 SNX25Q9H3E2 840 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 ELOVL6Q9H5J4 265 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 SMPD4Q9NXE4 827 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 CSDC2Q9Y534 153 aaKnown RBP4.9□□□□□ -1.63
NIPBL-204ENST00000504430 CARMIL2Q6F5E8 1435 aa4.9□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1W2PPQ1 181 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 A0A1W2PS29 197 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TYW5A2RUC4 315 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM210A6NLX4 147 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 KCNU1A8MYU2 1149 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 C1QTNF3-AMACRE9PGA6 284 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CCL24O00175 119 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 HAT1O14929 419 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 BCAS1O75363 584 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 STX11O75558 287 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 RGS11O94810 467 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FTH1P02794 183 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 DANCRP0C864 163 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SMIM18P0DKX4 95 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TSPAN8P19075 237 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 POLR2CP19387 275 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 NSFP46459 744 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ACADVLP49748 655 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 HERV-K104P63124 156 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 PMPCAQ10713 525 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 LAIR1Q6GTX8 287 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ANKRD54Q6NXT1 300 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CACUL1Q86Y37 369 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CCDC60Q8IWA6 550 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FOXRED2Q8IWF2 684 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FAM83FQ8NEG4 500 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 UBA3Q8TBC4 463 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms