RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FAM234BA2RU67 622 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NAP1L6A6NFF2 107 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NT5C1B-RDH14C9J2C7 533 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 KHNYNO15037 678 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PPM1DO15297 605 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GRID2O43424 1007 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MITFO75030 526 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MT-ND2P03891 347 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HAPLN1P10915 354 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HSD3B1P14060 373 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CTPS1P17812 591 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ATP6V1B2P21281 511 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DDX6P26196 483 aaKnown RBP eCLIP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CA5AP35218 305 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 RORCP51449 518 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TSPAN5P62079 268 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 IFITM3Q01628 133 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 EMX1Q04741 257 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ACSM1Q08AH1 577 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 IFRD2Q12894 506 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 RCAN2Q14206 197 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 VEPH1Q14D04 833 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GPR19Q15760 415 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SSX2Q16385 188 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PCSK7Q16549 785 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DUSP6Q16828 381 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DUOXA2Q1HG44 320 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PYHIN1Q6K0P9 492 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 FBXO46Q6PJ61 603 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM64Q6YI46 380 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CCDC149Q6ZUS6 474 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TRILQ7L0X0 811 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SLC9B2Q86UD5 537 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PDZD9Q8IXQ8 264 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 OFCC1Q8IZS5 231 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 LGI4Q8N135 537 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF441Q8N8Z8 693 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM145Q8NBT3 493 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 YIPF6Q96EC8 236 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 OTUB1Q96FW1 271 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SORCS2Q96PQ0 1159 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GPX7Q96SL4 187 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MECRQ9BV79 373 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 WDR55Q9H6Y2 383 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 REEP1Q9H902 201 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ACOT13Q9NPJ3 140 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SPHK1Q9NYA1 384 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MYEF2Q9P2K5 600 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 OSGIN1Q9UJX0 560 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MGAT4BQ9UQ53 548 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 A0A1B0GVC2 190 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 METTL21EPA6NDL7 271 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF729A6NN14 1252 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GMFGO60234 142 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 RNGTTO60942 597 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DIRAS3O95661 229 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MLYCDO95822 493 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HLA-DQB1P01920 261 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IL6P05231 212 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TPOP07202 933 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SPARCP09486 303 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ACSM4P0C7M7 580 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FAM157BP0CG42 384 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IL7RP16871 459 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IGFBP5P24593 272 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PAX6P26367 422 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 STOMP27105 288 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TGFBR2P37173 567 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DCTP40126 519 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PIK3CGP48736 1102 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EEF1A1P68104 462 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IRF3Q14653 427 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PUM1Q14671 1186 aaKnown RBP eCLIP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 STXBP2Q15833 593 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HYAL4Q2M3T9 481 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ATP6AP1LQ52LC2 224 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF667Q5HYK9 610 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EEF1A1P5Q5VTE0 462 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MAP1SQ66K74 1059 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM270Q6UE05 265 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 UQCC3Q6UW78 93 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CLEC20AQ6ZU45 233 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IFNEQ86WN2 208 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SKA3Q8IX90 412 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CENPLQ8N0S6 344 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LINC00471Q8N535 108 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 OR4F6Q8NGB9 312 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF431Q8TF32 576 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 KCNJ9Q92806 393 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 KAT2AQ92830 837 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DNASE1L2Q92874 299 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LRRC58Q96CX6 371 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SCRN2Q96FV2 425 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LURAP1Q96LR2 239 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CBWD1Q9BRT8 395 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TMPRSS13Q9BYE2 586 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SEMA6AQ9H2E6 1030 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 RNPEPQ9H4A4 650 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 BCL2L10Q9HD36 194 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ADPRHL2Q9NX46 363 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms