RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 NAGLUP54802 743 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 BTG2P78543 158 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 C19orf57Q0VDD7 668 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 RAPSNQ13702 412 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 CEP85LQ5SZL2 805 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 FRMD7Q6ZUT3 714 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 HPS6Q86YV9 775 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 SCUBE1Q8IWY4 988 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 PARP9Q8IXQ6 854 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 KBTBD2Q8IY47 623 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 ZNF595Q8IYB9 648 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 ZCCHC7Q8N3Z6 543 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 CCNYL1Q8N7R7 359 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 CDYL2Q8N8U2 506 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 PTCHD1Q96NR3 888 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 CSF3RQ99062 836 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 SORBS1Q9BX66 1292 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 LHPPQ9H008 270 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 C5AR2Q9P296 337 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 MRPS33Q9Y291 106 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 SCN3AQ9NY46 2000 aa17.13■□□□□ 0.33
PDLIM7-209ENST00000503346 IGHV3-20A0A0C4DH32 117 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 TCRBV16S1A1N1A0A5B0 115 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 B8ZZF3 427 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 H3BQF6 201 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 CLDN4O14493 209 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 TYROBPO43914 113 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SPAG7O75391 227 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 ESRRBO95718 433 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 KRT6AP02538 564 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 KRT6BP04259 564 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 ALPPP05187 535 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 ENO1P06733 434 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 PRR35P0CG20 571 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 ICAM2P13598 275 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 CREB1P16220 341 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 BSGP35613 385 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 KRT6CP48668 564 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 HNRNPFP52597 415 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 HSD17B7P56937 341 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SLAMF1Q13291 335 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 PCLAFQ15004 111 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 TNFAIP8L3Q5GJ75 292 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 IRAK1BP1Q5VVH5 260 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 RIPOR1Q6ZS17 1223 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 C10orf107Q8IVU9 208 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 FAM47BQ8NA70 645 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 TMEM52Q8NDY8 209 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 TCP10LQ8TDR4 215 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 AGAP11Q8TF27 550 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SELENOMQ8WWX9 145 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 THOC3Q96J01 351 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 FAM111AQ96PZ2 611 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 MAPKAP1Q9BPZ7 522 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 DDX31Q9H8H2 851 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 BRF2Q9HAW0 419 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 NECTIN3Q9NQS3 549 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 PRTFDC1Q9NRG1 225 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 FARSBQ9NSD9 589 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SLC17A7Q9P2U7 560 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 SPACA6W5XKT8 324 aa17.12■□□□□ 0.33
PDLIM7-209ENST00000503346 BOD1L1Q8NFC6 3051 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 A0A0A6YYD5 115 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 BLACEA4D250 179 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MANBAO00462 879 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 SEC24DO94855 1032 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 PDYNP01213 254 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MAOAP21397 527 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 OR4D2P58180 307 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 AP2B1P63010 937 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 ZNF33BQ06732 778 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 SGO1Q5FBB7 561 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 CFAP157Q5JU67 520 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 PLAG1Q6DJT9 500 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 METTL6Q8TCB7 284 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 PGM2Q96G03 612 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 LPAR4Q99677 370 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MID1IP1Q9NPA3 183 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 RRAGDQ9NQL2 400 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MS4A12Q9NXJ0 267 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 CLDN16Q9Y5I7 305 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 MED13Q9UHV7 2174 aa17.11■□□□□ 0.33
PDLIM7-209ENST00000503346 SYNDIG1LA6NDD5 238 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 TRIM13O60858 407 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 CTNSO60931 367 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 EEDO75530 441 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 HSD3B1P14060 373 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 HSD3B2P26439 372 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 HMOX2P30519 316 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 ACTN3Q08043 901 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 ASPHQ12797 758 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 EXT1Q16394 746 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 TCHHL1Q5QJ38 904 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 AGAP7PQ5VUJ5 663 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 FAM219BQ5XKK7 198 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms