RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 KCTD4Q8WVF5 259 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 NCLNQ969V3 563 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 SERINC2Q96SA4 455 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 LRRC1Q9BTT6 524 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 SORBS1Q9BX66 1292 aaKnown RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 PITHD1Q9GZP4 211 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 RAB17Q9H0T7 212 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 TRIM45Q9H8W5 580 aaPredicted RBP15.16■□□□□ 0.02
SCLT1-204ENST00000503215 ZDHHC18Q9NUE0 388 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 FBXW2Q9UKT8 454 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 DAPP1Q9UN19 280 aa15.16■□□□□ 0.02
SCLT1-204ENST00000503215 ARHGAP10A1A4S6 786 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 LRRC14BA6NHZ5 514 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 TMEM200CA6NKL6 621 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 SUPT3HB4E1H0 165 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 SAP18O00422 153 aaKnown RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 NME2P1O60361 137 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 SUPT3HO75486 399 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 TGFB1P01137 390 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 LTA4HP09960 611 aaKnown RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 NME2P22392 152 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 GSTM2P28161 218 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 STX2P32856 288 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 TRHRP34981 398 aaPredicted RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 RFC3P40938 356 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 MSH2P43246 934 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 MTTPP55157 894 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 HSD17B7P56937 341 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 ID2Q02363 134 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 CAV1Q03135 178 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 DMTNQ08495 405 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 MROH9Q5TGP6 573 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 TRIM40Q6P9F5 258 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 FGD2Q7Z6J4 655 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 CENPLQ8N0S6 344 aaPredicted RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 ZNF321PQ8N8H1 164 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 TMEM178AQ8NBL3 297 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 STAG3L4Q8TBR4 150 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 SEC16BQ96JE7 1060 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 MAPKAP1Q9BPZ7 522 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 EFCAB11Q9BUY7 163 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 MS4A8Q9BY19 250 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 PHACTR1Q9C0D0 580 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 NMRAL1Q9HBL8 299 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 NUDT4Q9NZJ9 180 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 PPIEQ9UNP9 301 aaKnown RBP15.15■□□□□ 0.02
SCLT1-204ENST00000503215 ZNF835Q9Y2P0 537 aa15.15■□□□□ 0.02
SCLT1-204ENST00000503215 PRSS44E7EML9 344 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CLDN4O14493 209 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 ASNA1O43681 348 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 KERAO60938 352 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 S100BP04271 92 aaPredicted RBP15.14■□□□□ 0.01
SCLT1-204ENST00000503215 C2P06681 752 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 PCNAP12004 261 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 ATP5A1P25705 553 aaKnown RBP15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CRABP2P29373 138 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CASP2P42575 452 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CLCN2P51788 898 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 NR0B1P51843 470 aaKnown RBP15.14■□□□□ 0.01
SCLT1-204ENST00000503215 ADORA2A-AS1P86434 159 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 E2F2Q14209 437 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CDSNQ15517 529 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 TBCCQ15814 346 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 LRRC70Q7Z2Q7 622 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 MDGA2Q7Z553 956 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 MRGPRGQ86SM5 289 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 HORMAD2Q8N7B1 307 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 ADAMTS18Q8TE60 1221 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 OR51B5Q9H339 312 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 GTF3C1Q12789 2109 aa15.14■□□□□ 0.01
SCLT1-204ENST00000503215 CTNSO60931 367 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 LDB3O75112 727 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 ITGA10O75578 1167 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 IFNA16P05015 189 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 LAPTM5Q13571 262 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 KRTCAP3Q53RY4 240 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-204ENST00000503215 SPPL2CQ8IUH8 684 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 SULF2Q8IWU5 870 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF595Q8IYB9 648 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 ACOT4Q8N9L9 421 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 OR7G3Q8NG95 312 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 PTPMT1Q8WUK0 201 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-204ENST00000503215 UBTD2Q8WUN7 234 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 VMP1Q96GC9 406 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 ALOXE3Q9BYJ1 711 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 COPS7BQ9H9Q2 264 aaPredicted RBP15.13■□□□□ 0.01
SCLT1-204ENST00000503215 ACOT9Q9Y305 439 aa15.13■□□□□ 0.01
SCLT1-204ENST00000503215 A0A088AWK7 358 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 K7EPI3 171 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF10P21506 573 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-204ENST00000503215 PTGER1P34995 402 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 MEOX1P50221 254 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 GPR85P60893 370 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 RBPJQ06330 500 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 TERF2Q15554 542 aa15.12■□□□□ 0.01
SCLT1-204ENST00000503215 HIST2H2ACQ16777 129 aaPredicted RBP15.12■□□□□ 0.01
SCLT1-204ENST00000503215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.12■□□□□ 0.01
SCLT1-204ENST00000503215 PAGE2BQ5JRK9 111 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms