RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SCYL3Q8IZE3 742 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ARHGAP24Q8N264 748 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 NAT8LQ8N9F0 302 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 BANPQ8N9N5 519 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ACMSDQ8TDX5 336 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 C10orf82Q8WW14 230 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 C1orf54Q8WWF1 131 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 CCDC127Q96BQ5 260 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 PGLYRP2Q96PD5 576 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TAAR1Q96RJ0 339 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 NAT9Q9BTE0 207 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 MAK16Q9BXY0 300 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 POLR3FQ9H1D9 316 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 C1orf21Q9H246 121 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 TRABDQ9H4I3 376 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 ASB7Q9H672 318 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 DENND2DQ9H6A0 471 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 ECT2Q9H8V3 914 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 NRBP2Q9NSY0 501 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 MRGBPQ9NV56 204 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 CYP39A1Q9NYL5 469 aa4.46□□□□□ -1.7
SSR3-209ENST00000498205 RBAKQ9NYW8 714 aaPredicted RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 CPSF3Q9UKF6 684 aaKnown RBP4.46□□□□□ -1.7
SSR3-209ENST00000498205 SF3B1O75533 1304 aaKnown RBP eCLIP4.46□□□□□ -1.7
SSR3-209ENST00000498205 KIF26BQ2KJY2 2108 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 LCTP09848 1927 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ZSWIM8A7E2V4 1837 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 GSTTP1A0A1W2PQM5 241 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 BCLAF3A2AJT9 711 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 LRRC72A6NJI9 287 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TCP10L2B9ZVM9 353 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 VILLO15195 856 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 BIRC5O15392 142 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 MAGEC1O60732 1142 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 SOCS5O75159 536 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TSPAN9O75954 239 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TPPPO94811 219 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 KCNK5O95279 499 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ANP32DO95626 131 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PLGP00747 810 aaPredicted RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 LDLRP01130 860 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 NEFHP12036 1026 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 MLNP12872 115 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 KRT5P13647 590 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 P4HA1P13674 534 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 CCDC130P13994 396 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ACADSP16219 412 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 DESP17661 470 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 GNAZP19086 355 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TCEA1P23193 301 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 DNAJB1P25685 340 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 MAGEA3P43357 314 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 GLIPR1P48060 266 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 RPL34P49207 117 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 SERPINB9P50453 376 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ARSEP51690 589 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 RAP1GDS1P52306 607 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 NLRP11P59045 1033 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 SNAP25P60880 206 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 XIAPP98170 497 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ILF2Q12905 390 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 KCNC3Q14003 757 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 RBM39Q14498 530 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 BOLA3Q53S33 107 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 DCUN1D2Q6PH85 259 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TMEM270Q6UE05 265 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 METTL7BQ6UX53 244 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PLXDC2Q6UX71 529 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 MFSD7Q6UXD7 560 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PIWIL4Q7Z3Z4 852 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 LCA5Q86VQ0 697 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 DNAAF5Q86Y56 855 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 APOBEC3FQ8IUX4 373 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 CCDC60Q8IWA6 550 aaPredicted RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 GPALPP1Q8IXQ4 340 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PPFIBP2Q8ND30 876 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 KLHDC9Q8NEP7 349 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 AGAP11Q8TF27 550 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PYROXD1Q8WU10 500 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TM9SF4Q92544 642 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 HAUS1Q96CS2 278 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 FAF2Q96CS3 445 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 OXNAD1Q96HP4 312 aaPredicted RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 RMDN2Q96LZ7 410 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 GFI1Q99684 422 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 C11orf70Q9BRQ4 267 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 FAM213AQ9BRX8 229 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 CNPY3Q9BT09 278 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 TRIM6Q9C030 488 aaPredicted RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 FZD8Q9H461 694 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 APOBEC3GQ9HC16 384 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 MRM3Q9HC36 420 aaKnown RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 MYOZ2Q9NPC6 264 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 ZNF302Q9NR11 478 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 HACD3Q9P035 362 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 PAK5Q9P286 719 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 KLHL9Q9P2J3 617 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 RCOR3Q9P2K3 495 aaPredicted RBP4.45□□□□□ -1.7
SSR3-209ENST00000498205 BAIAP2L1Q9UHR4 511 aa4.45□□□□□ -1.7
SSR3-209ENST00000498205 DNPEPQ9ULA0 475 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms