RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GRK7Q8WTQ7 553 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 FAM162AQ96A26 154 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 RBM18Q96H35 190 aaKnown RBP4.46□□□□□ -1.7
SF3B1-212ENST00000496458 FER1L6-AS2Q96M78 137 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 GBP5Q96PP8 586 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 PSMB7Q99436 277 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 THUMPD3Q9BV44 507 aaKnown RBP4.46□□□□□ -1.7
SF3B1-212ENST00000496458 JPT2Q9H910 190 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 SH3BGRL2Q9UJC5 107 aa4.46□□□□□ -1.7
SF3B1-212ENST00000496458 IGLV3-10A0A075B6K4 115 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 SYNJ2BP-COX16A0A087WUM0 186 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 A0A0U1RQK1 487 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ZNF320A2RRD8 509 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 NKX6-3A6NJ46 265 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 TMEM150CB9EJG8 249 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 PRSS46E5RG02 174 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 MPHOSPH10O00566 681 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 WDR46O15213 610 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ZBTB14O43829 449 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 KIF5CO60282 957 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 KERAO60938 352 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 HPP00738 406 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 MELTFP08582 738 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ADORA3P0DMS8 318 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 EEF2P13639 858 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 RPS2P15880 293 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ACTN3Q08043 901 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 C17orf67Q0P5P2 114 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 MORF4L2Q15014 288 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 EIPR1Q53HC9 387 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 TAF3Q5VWG9 929 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 BTNL8Q6UX41 500 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 CCDC73Q6ZRK6 1079 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 CATSPER3Q86XQ3 398 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 OR5M9Q8NGP3 310 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ZPLD1Q8TCW7 415 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 SSC4DQ8WTU2 575 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ZNF606Q8WXB4 792 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 KRT35Q92764 455 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 TMEM237Q96Q45 408 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ATP6V0BQ99437 205 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 UBAC1Q9BSL1 405 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ALKBH7Q9BT30 221 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 C3orf14Q9HBI5 128 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 RAB9BQ9NP90 201 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 ANAPC5Q9UJX4 755 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 PILRAQ9UKJ1 303 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 RUVBL2Q9Y230 463 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 MRPS18CQ9Y3D5 142 aaKnown RBP4.45□□□□□ -1.7
SF3B1-212ENST00000496458 HECW1Q76N89 1606 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 AGRNO00468 2067 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 CD109Q6YHK3 1445 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 CASKIN1Q8WXD9 1431 aa4.45□□□□□ -1.7
SF3B1-212ENST00000496458 PCF11O94913 1555 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 GLI2P10070 1586 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 LRRIQ1Q96JM4 1722 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 TRAV18A0A075B6X5 111 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 ARHGEF33A8MVX0 844 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 RNF103O00237 685 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 OGTO15294 1046 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 ZNF749O43361 778 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 SEC22BO75396 215 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 FDPSP14324 419 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 GP9P14770 177 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 PTAFRP25105 342 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 CRKLP46109 303 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 CDX1P47902 265 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 GMPSP49915 693 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 YWHAHQ04917 246 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 LRRC74AQ0VAA2 488 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 TNK1Q13470 666 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 WSCD2Q2TBF2 565 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 ZNF542PQ5EBM4 170 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 FAM182AQ5T1J6 154 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 SHQ1Q6PI26 577 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 PET117Q6UWS5 81 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 MACC1Q6ZN28 852 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 CEACAM19Q7Z692 300 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 DND1Q8IYX4 353 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 TEX26Q8N6G2 289 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 CCDC185Q8N715 623 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 ZNF540Q8NDQ6 660 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 RAD54LQ92698 747 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 SIPA1Q96FS4 1042 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 LURAP1Q96LR2 239 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 AK8Q96MA6 479 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 C1orf147Q96MC9 270 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 RAB3IPQ96QF0 476 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 PAPOLGQ9BWT3 736 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 FUT8Q9BYC5 575 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 TNMDQ9H2S6 317 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 RPF1Q9H9Y2 349 aaKnown RBP4.44□□□□□ -1.7
SF3B1-212ENST00000496458 IL1RAPQ9NPH3 570 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 DNAJB9Q9UBS3 223 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 DUSP12Q9UNI6 340 aa4.44□□□□□ -1.7
SF3B1-212ENST00000496458 ANXA2P2A6NMY6 339 aa4.43□□□□□ -1.7
SF3B1-212ENST00000496458 PDHXO00330 501 aa4.43□□□□□ -1.7
SF3B1-212ENST00000496458 SIGLEC5O15389 551 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms