RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CA7P43166 264 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 MSH2P43246 934 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 GPR143P51810 404 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 MTTPP55157 894 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 IRF8Q02556 426 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 RNFT1Q5M7Z0 435 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF595Q8IYB9 648 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 LAS2Q8IYD9 372 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 CPSF7Q8N684 471 aaKnown RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ADAMTS18Q8TE60 1221 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF473Q8WTR7 871 aaKnown RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ITLN2Q8WWU7 325 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 NCLNQ969V3 563 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 NXNL1Q96CM4 212 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 DEFB126Q9BYW3 111 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 NMRAL1Q9HBL8 299 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 PNO1Q9NRX1 252 aaKnown RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ADGRG4Q8IZF6 3080 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 TMEM200CA6NKL6 621 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 K7EPI3 171 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 RTCAO00442 366 aaKnown RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 SLC19A2O60779 497 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 CYB561P49447 251 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 HLCSP50747 726 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 CLCN2P51788 898 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 SLC13A2Q13183 592 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 LAPTM5Q13571 262 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 PAGE2BQ5JRK9 111 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 C8orf74Q6P047 294 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 TBC1D1Q86TI0 1168 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 CHERPQ8IWX8 916 aaKnown RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 RNF175Q8N4F7 328 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 HORMAD2Q8N7B1 307 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 THAP3Q8WTV1 239 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 VMP1Q96GC9 406 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 KCNC2Q96PR1 638 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 COPS7BQ9H9Q2 264 aaPredicted RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 ADAP2Q9NPF8 381 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 SNX15Q9NRS6 342 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 KCMF1Q9P0J7 381 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 TINAGQ9UJW2 476 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 MRPS33Q9Y291 106 aaKnown RBP13.31□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF835Q9Y2P0 537 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
VTI1A-209ENST00000496445 TACC2O95359 2948 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 CCL21O00585 134 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 FCHO1O14526 889 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 ZNHIT1O43257 154 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 SH3BGRLO75368 114 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 SCELO95171 688 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 HPDP32754 393 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-209ENST00000496445 HSF1Q00613 529 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 RBPJQ06330 500 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
VTI1A-209ENST00000496445 PCDH1Q08174 1060 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 C3AR1Q16581 482 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 MAPKAPK3Q16644 382 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 HIST2H2ACQ16777 129 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-209ENST00000496445 MROH9Q5TGP6 573 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 HIST2H2AA3Q6FI13 130 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 C16orf47Q6ZP98 133 aaPredicted RBP13.3□□□□□ -0.28
VTI1A-209ENST00000496445 MRRFQ96E11 262 aaKnown RBP13.3□□□□□ -0.28
VTI1A-209ENST00000496445 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 NINJ2Q9NZG7 142 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 FBXW2Q9UKT8 454 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
VTI1A-209ENST00000496445 EML6Q6ZMW3 1958 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 A0A087X1B8 175 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 LRRC14BA6NHZ5 514 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 CLDN4O14493 209 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 CTNSO60931 367 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ITGA10O75578 1167 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 C2P06681 752 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 PCNAP12004 261 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF24P17028 368 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 MEOX1P50221 254 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ADORA2A-AS1P86434 159 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 SETDB1Q15047 1291 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ELAVL1Q15717 326 aaKnown RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.282e-7■□□□□ 9.3
VTI1A-209ENST00000496445 GRHL2Q6ISB3 625 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 MED27Q6P2C8 311 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 Q6ZPB1 254 aaPredicted RBP13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF321PQ8N8H1 164 aa13.29□□□□□ -0.28
VTI1A-209ENST00000496445 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms