RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 KLC4Q9NSK0 619 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 SNTG1Q9NSN8 517 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 ETNK2Q9NVF9 386 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 OGFRQ9NZT2 677 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 CWC15Q9P013 229 aaKnown RBP4.1□□□□□ -1.75
VPS52-222ENST00000495981 ABI3Q9P2A4 366 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 TLK1Q9UKI8 766 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 TMEM184BQ9Y519 407 aaPredicted RBP4.1□□□□□ -1.75
VPS52-222ENST00000495981 TNRC6AQ8NDV7 1962 aaKnown RBP4.1□□□□□ -1.75
VPS52-222ENST00000495981 AKAP6Q13023 2319 aa4.1□□□□□ -1.75
VPS52-222ENST00000495981 NPEPPSL1A6NEC2 478 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TMEM191CA6NGB0 347 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ARHGAP42A6NI28 874 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 LILRA5A6NI73 299 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 UNC119BA6NIH7 251 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 A8MX80 341 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 DFFAO00273 331 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ZG16O60844 167 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PALMO75781 387 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 STK17BO94768 372 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 C9P02748 559 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PRR35P0CG20 571 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ZNF8P17098 575 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 PSMA2P25787 234 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ALDH4A1P30038 563 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 MIPP30301 263 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 HSPA9P38646 679 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 ACTR1BP42025 376 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ZNF84P51523 738 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 COPB1P53618 953 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 PMS2P54278 862 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 GFERP55789 205 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TPTEP56180 551 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ACTR1AP61163 376 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 MAXP61244 160 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 SUMO2P61956 95 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 TP53BP2Q13625 1128 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ZNF235Q14590 738 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 CRYMQ14894 314 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 RPE65Q16518 533 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TPD52L1Q16890 204 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 SMTNL2Q2TAL5 461 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ASTE1Q2TB18 679 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 SPDYE7PQ495Y7 208 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ERMARDQ5T6L9 678 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 KAZNQ674X7 775 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 KIAA0930Q6ICG6 404 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 SCYL2Q6P3W7 929 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TMEM71Q6P5X7 295 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 DOK6Q6PKX4 331 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 WDR74Q6RFH5 385 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 RRM2BQ7LG56 351 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ARHGAP22Q7Z5H3 698 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PIM3Q86V86 326 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PSTKQ8IV42 348 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 CEP97Q8IW35 865 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TEX26Q8N6G2 289 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 AVL9Q8NBF6 648 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TOR1AIP2Q8NFQ8 470 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 RP9Q8TA86 221 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 PIH1D2Q8WWB5 315 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ATP6V1E2Q96A05 226 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PTCD3Q96EY7 689 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 SCRN2Q96FV2 425 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 ZNF599Q96NL3 588 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 CATSPER2Q96P56 530 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 CSPG4P5Q96PW8 444 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 LYSMD1Q96S90 227 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 AGAP2Q99490 1192 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 AGPAT1Q99943 283 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 TDRD1Q9BXT4 1180 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 MAK16Q9BXY0 300 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 ABCG8Q9H221 673 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 GPN2Q9H9Y4 310 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 Q9N2J8 555 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS52-222ENST00000495981 IL1RAPL1Q9NZN1 696 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 MRPL15Q9P015 296 aaKnown RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 VPS18Q9P253 973 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 RCOR3Q9P2K3 495 aaPredicted RBP4.09□□□□□ -1.75
VPS52-222ENST00000495981 NLKQ9UBE8 527 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 CD84Q9UIB8 345 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 AMFRQ9UKV5 643 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 PPIL1Q9Y3C6 166 aa4.09□□□□□ -1.75
VPS52-222ENST00000495981 RYR3Q15413 4870 aa4.09□□□□□ -1.76
VPS52-222ENST00000495981 FLNAP21333 2647 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 A0A0J9YYE9 177 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 A0A1W2PQ67 120 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 GLOD5A6NK44 160 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 TMEM200CA6NKL6 621 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 LRRC53A6NM62 1247 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 MCIDASD6RGH6 385 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PRSS44E7EML9 344 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PES1O00541 588 aaKnown RBP4.08□□□□□ -1.76
VPS52-222ENST00000495981 INPP4BO15327 924 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 FAM20BO75063 409 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 PLATP00750 562 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 ADAP00813 363 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 TRBC1P01850 177 aa4.08□□□□□ -1.76
VPS52-222ENST00000495981 HLA-DQB2P05538 268 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms