RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SNTB1Q13884 538 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 RUNX2Q13950 521 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 RCN2Q14257 317 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TERF2Q15554 542 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TESK1Q15569 626 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 C18orf21Q32NC0 220 aaPredicted RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 GXYLT1Q4G148 440 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 MSS51Q4VC12 460 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TEDDM1Q5T9Z0 273 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 SBSNQ6UWP8 590 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TMIGD1Q6UXZ0 262 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 B3GNT6Q6ZMB0 384 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 CAPN12Q6ZSI9 719 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 DMRTC2Q8IXT2 367 aaPredicted RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 PDIK1LQ8N165 341 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TMEM132CQ8N3T6 1108 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 TTLQ8NG68 377 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 C16orf52Q8NHV5 167 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 DAZLQ92904 295 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 EXT2Q93063 718 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 JSRP1Q96MG2 331 aaPredicted RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 TTTY12Q9BZ98 90 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 REXO4Q9GZR2 422 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 CLK4Q9HAZ1 481 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 DEPPQ9NTK1 212 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 WWOXQ9NZC7 414 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 CTNNAL1Q9UBT7 734 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 COPS7AQ9UBW8 275 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 ZNF223Q9UK11 482 aaPredicted RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 IKZF3Q9UKT9 509 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 JRKLQ9Y4A0 524 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 HRH3Q9Y5N1 445 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 LIPGQ9Y5X9 500 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 AKAP9Q99996 3911 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 NINQ8N4C6 2090 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 FAM95CA0A1B0GW59 222 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 C17orf105B2RV13 164 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 DNALI1O14645 258 aaPredicted RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 BCKDKO14874 412 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 LDB3O75112 727 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 SH3BGRLO75368 114 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 TOXO94900 526 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 FREM3P0C091 2139 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 C1GALT1C1LP0DN25 315 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 CD99P14209 185 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 ZNF37AP17032 561 aaPredicted RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 HPDP32754 393 aaPredicted RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 ZFP36L2P47974 494 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 DNASE1L1P49184 302 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 FNTAP49354 379 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 MAN2A2P49641 1150 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 HNMTP50135 292 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 GPR143P51810 404 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 TGM3Q08188 693 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 TSNQ15631 228 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 ELAVL1Q15717 326 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 FBXO48Q5FWF7 155 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 XKR6Q5GH73 641 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 NDUFAF5Q5TEU4 345 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 TRMT10BQ6PF06 316 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 RTL4Q6ZR62 310 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 IGDCC3Q8IVU1 814 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 CNTN4Q8IWV2 1026 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 SCUBE1Q8IWY4 988 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 GPALPP1Q8IXQ4 340 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 ZNF595Q8IYB9 648 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 ZZZ3Q8IYH5 903 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 RASGEF1CQ8N431 466 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 NKAPQ8N5F7 415 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 TMEM52Q8NDY8 209 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 MYRIPQ8NFW9 859 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 MS4A6EQ96DS6 147 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 VPS39Q96JC1 886 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 RASL10BQ96S79 203 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 CSF3RQ99062 836 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 FAM173AQ9BQD7 235 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 POLDIP3Q9BY77 421 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 ALOXE3Q9BYJ1 711 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 DDX47Q9H0S4 455 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 SLC24A3Q9HC58 644 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 SACM1LQ9NTJ5 587 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 DNAJB12Q9NXW2 375 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 MYOTQ9UBF9 498 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 KCNN3Q9UGI6 736 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 CORO1CQ9ULV4 474 aaPredicted RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 OARD1Q9Y530 152 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 SPACA6W5XKT8 324 aa8.94□□□□□ -0.98
UBR4-216ENST00000494503 PRRC2AP48634 2157 aaKnown RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 MAP1AP78559 2803 aaPredicted RBP8.94□□□□□ -0.98
UBR4-216ENST00000494503 ARHGAP21Q5T5U3 1957 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 ANKHD1Q8IWZ3 2542 aaKnown RBP8.93□□□□□ -0.98
UBR4-216ENST00000494503 LRIT2A6NDA9 550 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 TGFBR3LH3BV60 316 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
UBR4-216ENST00000494503 HOXD4P09016 255 aaPredicted RBP8.93□□□□□ -0.98
UBR4-216ENST00000494503 CELA3AP09093 270 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 SMIM10L1P0DMW3 83 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 PCNAP12004 261 aa8.93□□□□□ -0.98
UBR4-216ENST00000494503 COX7A2P14406 83 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms