RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PLLPQ9Y342 182 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 RNF11Q9Y3C5 154 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 UNC79Q9P2D8 2635 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 A0A1W2PPW3 197 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SLC5A10A0PJK1 596 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CLEC18AA5D8T8 446 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ARGFXA6NJG6 315 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 IQCF5A8MTL0 148 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 LIASO43766 372 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 H2AFYO75367 372 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 BPGMP07738 259 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 F7P08709 466 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CBSLP0DN79 551 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 NAT2P11245 290 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ZNF26P17031 533 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CXCR2P25025 360 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 RRM2P31350 389 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CBSP35520 551 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 HPCAL1P37235 193 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 PRIM2P49643 509 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ARL4DP49703 201 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 AP2S1P53680 142 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ITGA1P56199 1179 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CDKL1Q00532 357 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 MC1RQ01726 317 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ACY1Q03154 408 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CACNG1Q06432 222 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ILF2Q12905 390 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 NAB1Q13506 487 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SEMA5AQ13591 1074 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 UBAP2LQ14157 1087 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 GPR33Q49SQ1 333 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 PRR30Q53SZ7 412 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 INTS11Q5TA45 600 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ZNF385CQ66K41 422 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CLEC18BQ6UXF7 455 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 UNC5AQ6ZN44 842 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SLC26A11Q86WA9 606 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 KMT5CQ86Y97 462 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 HPS6Q86YV9 775 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 LURAP1LQ8IV03 231 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 DSELQ8IZU8 1212 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CLYBLQ8N0X4 340 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 PDIK1LQ8N165 341 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 CLEC18CQ8NCF0 446 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 PIK3C3Q8NEB9 887 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ACVR1CQ8NER5 493 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 RP9Q8TA86 221 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 STYXQ8WUJ0 223 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ZFPM2Q8WW38 1151 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 TFGQ92734 400 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 HDAC10Q969S8 669 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 MAELQ96JY0 434 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 IL17FQ96PD4 163 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 OR2A14Q96R47 310 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 GON7Q9BXV9 100 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 TRIM15Q9C019 465 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SPRTNQ9H040 489 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 TP63Q9H3D4 680 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SRMSQ9H3Y6 488 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 TFB2MQ9H5Q4 396 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 LRRC40Q9H9A6 602 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 COPS7BQ9H9Q2 264 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SIAEQ9HAT2 523 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ZNF304Q9HCX3 659 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ACTR10Q9NZ32 417 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 MARCH4Q9P2E8 410 aaPredicted RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 NUP50Q9UKX7 468 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 FARSAQ9Y285 508 aaKnown RBP7.8□□□□□ -1.16
HDAC6-234ENST00000493923 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SPEF1Q9Y4P9 236 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 SVILO95425 2214 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
HDAC6-234ENST00000493923 C17orf113A0A1B0GUU1 675 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 C21orf140B9A014 251 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 MEN1O00255 615 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 BET1O15155 118 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CPNE3O75131 537 aaKnown RBP7.79□□□□□ -1.16
HDAC6-234ENST00000493923 RFPL1O75677 317 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 PTTG1O95997 202 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 GOT2P00505 430 aaKnown RBP7.79□□□□□ -1.16
HDAC6-234ENST00000493923 SERPINE1P05121 402 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 UGT2B7P16662 529 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 NAGAP17050 411 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 PRKCAP17252 672 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 NDUFS1P28331 727 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CD40LGP29965 261 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CCR7P32248 378 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CRHR1P34998 444 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 HADHAP40939 763 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 UQCRFS1P47985 274 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CCL11P51671 97 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 CRADDP78560 199 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 IFITM2Q01629 132 aa7.79□□□□□ -1.16
HDAC6-234ENST00000493923 GPS1Q13098 491 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms