RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 KCNK13Q9HB14 408 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 MKKSQ9NPJ1 570 aaPredicted RBP11.77□□□□□ -0.53
SNX17-208ENST00000493711 LHX9Q9NQ69 397 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 THSD1Q9NS62 852 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 TMEM45AQ9NWC5 275 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 DHCR7Q9UBM7 475 aaKnown RBP11.77□□□□□ -0.53
SNX17-208ENST00000493711 ACSL6Q9UKU0 697 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.53
SNX17-208ENST00000493711 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
SNX17-208ENST00000493711 MAP4K5Q9Y4K4 846 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 NEUROG3Q9Y4Z2 214 aa11.77□□□□□ -0.53
SNX17-208ENST00000493711 ANKRD11Q6UB99 2663 aaPredicted RBP11.77□□□□□ -0.53
SNX17-208ENST00000493711 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 A0A1W2PNU3 283 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 C9orf172C9J069 976 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 C9J4A7 227 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 SGK494L7N484 410 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 PSMD12O00232 456 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 AGRPO00253 132 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 RTCAO00442 366 aaKnown RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 PRMT3O60678 531 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 NTRK1P04629 796 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 CYC1P08574 325 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 BCKDHAP12694 445 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 DRD2P14416 443 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 JAK1P23458 1154 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 RORAP35398 523 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 BUD31P41223 144 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 ATP4BP51164 291 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 SLAMF1Q13291 335 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 HEPACAMQ14CZ8 416 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 RPS6KA2Q15349 733 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 ARHGAP40Q5TG30 622 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 IL23RQ5VWK5 629 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 MRM1Q6IN84 353 aaKnown RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 CGB2Q6NT52 195 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 MED25Q71SY5 747 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 PIGWQ7Z7B1 504 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 PDSS2Q86YH6 399 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 DSELQ8IZU8 1212 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 THOC1Q96FV9 657 aaKnown RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 OR1F2PQ96R84 312 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 OR52B2Q96RD2 323 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 MYNNQ9NPC7 610 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 C14orf105Q9NVL8 296 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 GPN3Q9UHW5 284 aaPredicted RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 NXT1Q9UKK6 140 aaKnown RBP11.76□□□□□ -0.53
SNX17-208ENST00000493711 PADI1Q9ULC6 663 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 ARL2BPQ9Y2Y0 163 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 PKD1L2Q7Z442 2459 aa11.76□□□□□ -0.53
SNX17-208ENST00000493711 RP1P56715 2156 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 CDRT15L2A8MXV6 281 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 C4orf51C9J302 202 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 STMND1H3BQB6 276 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 CLDN4O14493 209 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 CHST10O43529 356 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 CCDC22O60826 627 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 RDH16O75452 317 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 TIAF1O95411 115 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 DLGAP3O95886 979 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 PRPS1L1P21108 318 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 CERS1P27544 350 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 PPP2R1BP30154 601 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 SLC5A2P31639 672 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 MRPL19P49406 292 aaKnown RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 RAB38P57729 211 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 RAE1P78406 368 aaKnown RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 OCA2Q04671 838 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 BIKQ13323 160 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 PRAMEF17Q5VTA0 474 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 ZNF793Q6ZN11 406 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 R3HCC1LQ7Z5L2 792 aaKnown RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 SAMD14Q8IZD0 417 aaPredicted RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 CA13Q8N1Q1 262 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 TMEM132CQ8N3T6 1108 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 NATD1Q8N6N6 113 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 C10orf82Q8WW14 230 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 MTERF3Q96E29 417 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 ZNF764Q96H86 408 aaPredicted RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 PRPF18Q99633 342 aaKnown RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 EBF4Q9BQW3 602 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 SPRY4Q9C004 299 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 TGIF2Q9GZN2 237 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 WDR54Q9H977 334 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 AIG1Q9NVV5 245 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 EHD3Q9NZN3 535 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 IFT80Q9P2H3 777 aaPredicted RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 ZNF282Q9UDV7 671 aaPredicted RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 PSME2Q9UL46 239 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 DAPP1Q9UN19 280 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
SNX17-208ENST00000493711 POLR3HQ9Y535 204 aaPredicted RBP11.75□□□□□ -0.53
SNX17-208ENST00000493711 ASB4Q9Y574 426 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms