RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CPEB2Q7Z5Q1 589 aaKnown RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 ANKRD37Q7Z713 158 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 EXOC3L1Q86VI1 746 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 GALNT16Q8N428 558 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 FAM47BQ8NA70 645 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 PLPP5Q8NEB5 264 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 FDCSPQ8NFU4 85 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 METTL6Q8TCB7 284 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 AGAP11Q8TF27 550 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 TSLPQ969D9 159 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 PGM2Q96G03 612 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 PTCHD1Q96NR3 888 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 ZNF700Q9H0M5 742 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 STMN4Q9H169 189 aaPredicted RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 BRF2Q9HAW0 419 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 PRDM9Q9NQV7 894 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 FARSBQ9NSD9 589 aaKnown RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 RIC8BQ9NVN3 520 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 GPR83Q9NYM4 423 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 TP53TG5Q9Y2B4 290 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 PCDHGA9Q9Y5G4 932 aaKnown RBP12.03□□□□□ -0.48
CLIP2-209ENST00000493166 COL6A6A6NMZ7 2263 aa12.03□□□□□ -0.48
CLIP2-209ENST00000493166 TLN1Q9Y490 2541 aaKnown RBP12.02□□□□□ -0.48
CLIP2-209ENST00000493166 IGHV3-20A0A0C4DH32 117 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 GOLGA6L10A6NI86 522 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 H3BQF6 201 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MANBAO00462 879 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CLDN4O14493 209 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 UBFD1O14562 309 aaKnown RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CTIFO43310 598 aaKnown RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CRCPO75575 148 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 SEC24DO94855 1032 aaPredicted RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 SCELO95171 688 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 PRB1P04280 392 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MAOAP21397 527 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 ALDH3A1P30838 453 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 PGDP52209 483 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 BTG2P78543 158 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 ACTN3Q08043 901 aaPredicted RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 SLAMF1Q13291 335 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MYBPC3Q14896 1274 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 PCOLCEQ15113 449 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 TCHHL1Q5QJ38 904 aaPredicted RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 FAM219BQ5XKK7 198 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CYP20A1Q6UW02 462 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 ZCCHC7Q8N3Z6 543 aaKnown RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CSF3RQ99062 836 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 HBEGFQ99075 208 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MAPKAP1Q9BPZ7 522 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 TUBB6Q9BUF5 446 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MECRQ9BV79 373 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 NUDT9Q9BW91 350 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 SSU72Q9NP77 194 aaKnown RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 PRTFDC1Q9NRG1 225 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 ARGLU1Q9NWB6 273 aaPredicted RBP12.02□□□□□ -0.49
CLIP2-209ENST00000493166 AHSPQ9NZD4 102 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 SLC12A4Q9UP95 1085 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 MMACHCQ9Y4U1 282 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CFAP46Q8IYW2 2715 aa12.02□□□□□ -0.49
CLIP2-209ENST00000493166 CYR61O00622 381 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 KLHL41O60662 606 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ULK1O75385 1050 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 EEDO75530 441 aaKnown RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ALPPP05187 535 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 HSD3B1P14060 373 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 NR1D1P20393 614 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 CPN2P22792 545 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 HSD3B2P26439 372 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 BSGP35613 385 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 HNRNPFP52597 415 aaKnown RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 HSD17B7P56937 341 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 SOX8P57073 446 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 OR4D2P58180 307 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 NFATC3Q12968 1075 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 CSTF3Q12996 717 aaKnown RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 SLC13A2Q13183 592 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 CASP8Q14790 479 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 SFT2D3Q587I9 215 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 TNFAIP8L3Q5GJ75 292 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 VWA5B1Q5TIE3 1220 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ASB18Q6ZVZ8 466 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 PAGE2Q7Z2X7 111 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 NUDT13Q86X67 352 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 KBTBD2Q8IY47 623 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF595Q8IYB9 648 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 TMEM52Q8NDY8 209 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 THOC3Q96J01 351 aaKnown RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 CNDP1Q96KN2 507 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 KCNA7Q96RP8 456 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 GATA5Q9BWX5 397 aaPredicted RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF717Q9BY31 904 aaPredicted RBP12.01□□□□□ -0.49
CLIP2-209ENST00000493166 MRPL1Q9BYD6 325 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms