RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MTTPP55157 894 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CASP6P55212 293 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MRPS25P82663 173 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 OC90Q02509 493 aaPredicted RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CAV1Q03135 178 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 DLG1Q12959 904 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CALCOCO2Q13137 446 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 LAPTM5Q13571 262 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CDSNQ15517 529 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 TRADDQ15628 312 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ELAVL1Q15717 326 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MAPKAPK3Q16644 382 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PDK4Q16654 411 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM35AQ53FP2 167 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 FRA10AC1Q70Z53 315 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CCDC91Q7Z6B0 441 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 SULF2Q8IWU5 870 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 GPALPP1Q8IXQ4 340 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 LAS2Q8IYD9 372 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CYP4X1Q8N118 509 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 GHDCQ8N2G8 530 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CPSF7Q8N684 471 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 FAM98AQ8NCA5 519 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MORN4Q8NDC4 146 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 SRFBP1Q8NEF9 429 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 C7orf57Q8NEG2 295 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 RHEBL1Q8TAI7 183 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 STAG3L4Q8TBR4 150 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF473Q8WTR7 871 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CDKL2Q92772 493 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ESAMQ96AP7 390 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ANKRD9Q96BM1 317 aaPredicted RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 FAR2Q96K12 515 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PHF12Q96QT6 1004 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 VKORC1Q9BQB6 163 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MS4A8Q9BY19 250 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 DEFB126Q9BYW3 111 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 ADAP2Q9NPF8 381 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 PRTFDC1Q9NRG1 225 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 MYOTQ9UBF9 498 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 TINAGQ9UJW2 476 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 NPIPA1Q9UND3 350 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 KLF13Q9Y2Y9 288 aaPredicted RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 YARS2Q9Y2Z4 477 aaKnown RBP7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 CCDC168Q8NDH2 2452 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 TACC2O95359 2948 aa7.8□□□□□ -1.16
SMARCB1-207ENST00000491967 SPG11Q96JI7 2443 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NINQ8N4C6 2090 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 A0A088AWK7 358 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TRBV11-1A0A0K0K1C0 115 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NCF1BA6NI72 391 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NCF1CA8MVU1 366 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 KLRC4-KLRK1H3BQV0 150 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 CLGNO14967 610 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 KERAO60938 352 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ITGA10O75578 1167 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ZFAND5O76080 213 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NCF1P14598 390 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF24P17028 368 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF10P21506 573 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ATP5A1P25705 553 aaKnown RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TNFRSF8P28908 595 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 CRABP2P29373 138 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 SERPINB1P30740 379 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 SPRP35270 261 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 PLA2G16P53816 162 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 SLC12A2P55011 1212 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ETF1P62495 437 aaKnown RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NAB1Q13506 487 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 RCN2Q14257 317 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 KBTBD12Q3ZCT8 623 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 CMPK2Q5EBM0 449 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 XKR6Q5GH73 641 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TRIM40Q6P9F5 258 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF793Q6ZN11 406 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 LRRC70Q7Z2Q7 622 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 MDGA2Q7Z553 956 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF295-AS1Q8N0V1 137 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM132CQ8N3T6 1108 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ACOT4Q8N9L9 421 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 FBXO25Q8TCJ0 367 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 NCLNQ969V3 563 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 GPR78Q96P69 363 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 F2RL3Q96RI0 385 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 CSF3RQ99062 836 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TBCDQ9BTW9 1192 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 TRIM8Q9BZR9 551 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 UNKQ9C0B0 810 aaKnown RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ROGDIQ9GZN7 287 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ENKD1Q9H0I2 346 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 DPH5Q9H2P9 285 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 RUBCNLQ9H714 662 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 DEPPQ9NTK1 212 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 RYDENQ9NUL5 291 aaKnown RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 PSD3Q9NYI0 1048 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms