RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 CAPN10Q9HC96 672 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 ZNF226Q9NYT6 803 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 PCDHGB2Q9Y5G2 931 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 B4DXG7 233 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 FZD9O00144 591 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 LYRM1O43325 122 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 CKMP06732 381 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 NR2F1P10589 423 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 CHMP24386 653 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 SPAM1P38567 509 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 PREPP48147 710 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 CDH4P55283 916 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 RETSATQ6NUM9 610 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 IL20RBQ6UXL0 311 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 RFLNAQ6ZTI6 216 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
ERCC3-208ENST00000491292 GALNT7Q86SF2 657 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 DENND6BQ8NEG7 585 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 EXOSC8Q96B26 276 aaKnown RBP9.42□□□□□ -0.9
ERCC3-208ENST00000491292 FCRL4Q96PJ5 515 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 IL26Q9NPH9 171 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 MRPL39Q9NYK5 338 aaKnown RBP9.42□□□□□ -0.9
ERCC3-208ENST00000491292 NDUFAF4Q9P032 175 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 IL17CQ9P0M4 197 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 STUB1Q9UNE7 303 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 PCM1Q15154 2024 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 CCDC88CQ9P219 2028 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 A0A1W2PPK0 400 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 GABRR3A8MPY1 467 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 PRRG1O14668 218 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 SGTAO43765 313 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 PRLP01236 227 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 HIST2H2AA3Q6FI13 130 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 FRMPD2BQ6IN97 320 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 OLIG3Q7RTU3 272 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 DNAJB8Q8NHS0 232 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
ERCC3-208ENST00000491292 RIT1Q92963 219 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 LRR1Q96L50 414 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 C5AR2Q9P296 337 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 EXTL2Q9UBQ6 330 aa9.42□□□□□ -0.9
ERCC3-208ENST00000491292 COL11A1P12107 1806 aaPredicted RBP9.42□□□□□ -0.9
ERCC3-208ENST00000491292 CIB4A0PJX0 185 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 C2orf78A6NCI8 922 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 WASHC1A8K0Z3 465 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 UGT2B17O75795 530 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 KLK1P06870 262 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 KIR2DL3P43628 341 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 BDKRB1P46663 353 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SELENOWP63302 87 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 GINS1Q14691 196 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SERPINA13PQ6UXR4 307 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CEACAM20Q6UY09 585 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SERPINA11Q86U17 422 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CCDC190Q86UF4 302 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 PEX13Q92968 403 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ADARB2Q9NS39 739 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 MRPL15Q9P015 296 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ADAM30Q9UKF2 790 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 NDRG2Q9UN36 371 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 DYRK1BQ9Y463 629 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 RGS13O14921 159 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 FABP7O15540 132 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 EEF1E1O43324 174 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ZNF780AO75290 641 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ALPPL2P10696 532 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 AMD1P17707 334 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 PPIBP23284 216 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 HOXC13P31276 330 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CSKP41240 450 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CTBP2P56545 445 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 TAS2R50P59544 299 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 GPR50Q13585 617 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CCSAPQ6IQ19 270 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 GDF6Q6KF10 455 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 MZT2AQ6P582 158 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SMARCD3Q6STE5 483 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 RASSF6Q6ZTQ3 369 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ADGRD2Q7Z7M1 963 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 SPERTQ8NA61 448 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 NLGN4YQ8NFZ3 816 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CHAC2Q8WUX2 184 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 GEMIN6Q8WXD5 167 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 UFD1Q92890 307 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 MGME1Q9BQP7 344 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 ABCG5Q9H222 651 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 FAM120CQ9NX05 1096 aaKnown RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 RABL2AQ9UBK7 228 aaPredicted RBP9.41□□□□□ -0.9
ERCC3-208ENST00000491292 NEU3Q9UQ49 428 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 NAALAD2Q9Y3Q0 740 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 CENPFP49454 3210 aa9.41□□□□□ -0.9
ERCC3-208ENST00000491292 A0A1W2PRB8 838 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms