RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CLNKQ7Z7G1 428 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 HORMAD2Q8N7B1 307 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 TMEM178AQ8NBL3 297 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 OR7G3Q8NG95 312 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 RHEBL1Q8TAI7 183 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 ADAMTS18Q8TE60 1221 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 FRMD6Q96NE9 622 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 GPR78Q96P69 363 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
HMGN1-219ENST00000491183 DMGDHQ9UI17 866 aaKnown RBP16.8■□□□□ 0.28
HMGN1-219ENST00000491183 A0A087X1B8 175 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 TRBV11-1A0A0K0K1C0 115 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 RTCAO00442 366 aaKnown RBP16.79■□□□□ 0.28
HMGN1-219ENST00000491183 CTNSO60931 367 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 SH3BGRLO75368 114 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 TGFB1P01137 390 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 ATP5A1P25705 553 aaKnown RBP16.79■□□□□ 0.28
HMGN1-219ENST00000491183 CYB561P49447 251 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 HLCSP50747 726 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 CLCN2P51788 898 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 MAPKAPK3Q16644 382 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 WHAMMP3Q1A5X7 153 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 RELL1Q8IUW5 271 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 RNF175Q8N4F7 328 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 MMGT1Q8N4V1 131 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 TEX9Q8N6V9 391 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 THAP3Q8WTV1 239 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-219ENST00000491183 KCNC2Q96PR1 638 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 MAPKAP1Q9BPZ7 522 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 TBCDQ9BTW9 1192 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 ACSS3Q9H6R3 686 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 COPS7BQ9H9Q2 264 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-219ENST00000491183 MRPS33Q9Y291 106 aaKnown RBP16.79■□□□□ 0.28
HMGN1-219ENST00000491183 CACNA1DQ01668 2161 aa16.79■□□□□ 0.28
HMGN1-219ENST00000491183 A0A096LPK6 155 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 TRGV8A0A0C4DH27 118 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 LRRC14BA6NHZ5 514 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 KLK8O60259 260 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 PRKNO60260 465 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 NME2P1O60361 137 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 SLC25A12O75746 678 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 ALDOAP04075 364 aaKnown RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 PCNAP12004 261 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 EPB42P16452 691 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 NME2P22392 152 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 CA7P43166 264 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 ALDH6A1Q02252 535 aaKnown RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 TGM3Q08188 693 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 SETDB1Q15047 1291 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 ACAP2Q15057 778 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 UAP1Q16222 522 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 PFKFB4Q16877 469 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 FAM83EQ2M2I3 478 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 RNFT1Q5M7Z0 435 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 GRHL2Q6ISB3 625 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 CCDC91Q7Z6B0 441 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 SIAH3Q8IW03 269 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 ACOT4Q8N9L9 421 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 NOA1Q8NC60 698 aaKnown RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 SRFBP1Q8NEF9 429 aaKnown RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 UBE2E3Q969T4 207 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 NCLNQ969V3 563 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 GPR137Q96N19 417 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 FUT8Q9BYC5 575 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 TSPAN10Q9H1Z9 355 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-219ENST00000491183 LYRM4Q9HD34 91 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 ADAP2Q9NPF8 381 aa16.78■□□□□ 0.28
HMGN1-219ENST00000491183 TMEM200CA6NKL6 621 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 NPIPA5E9PKD4 350 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 SAP18O00422 153 aaKnown RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 FCHO1O14526 889 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 SCELO95171 688 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 KLHL2O95198 593 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 HIST1H1TP22492 207 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 TYK2P29597 1187 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 PHBP35232 272 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 ELAVL1Q15717 326 aaKnown RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 TMEM35AQ53FP2 167 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 KRTCAP3Q53RY4 240 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 DEPDC1Q5TB30 811 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 C16orf47Q6ZP98 133 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 CHSY3Q70JA7 882 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 PLD6Q8N2A8 252 aaKnown RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 PTPMT1Q8WUK0 201 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 SORBS1Q9BX66 1292 aaKnown RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 ALOXE3Q9BYJ1 711 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 ROGDIQ9GZN7 287 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 OR51B5Q9H339 312 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 CDC42EP4Q9H3Q1 356 aaKnown RBP16.77■□□□□ 0.28
HMGN1-219ENST00000491183 VTI1BQ9UEU0 232 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 FBXW2Q9UKT8 454 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 NPIPA1Q9UND3 350 aa16.77■□□□□ 0.28
HMGN1-219ENST00000491183 UNC79Q9P2D8 2635 aa16.77■□□□□ 0.27
HMGN1-219ENST00000491183 CCDC189A1A4V9 331 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 CCL21O00585 134 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 SLC19A2O60779 497 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 LDB3O75112 727 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms