RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 SAP25Q8TEE9 199 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 POP5Q969H6 163 aaKnown RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 CCDC138Q96M89 665 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 PALMDQ9NP74 551 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 CHCHD3Q9NX63 227 aaKnown RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 E2F6O75461 281 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 ZBTB11O95625 1053 aaPredicted RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 BCKDHAP12694 445 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 IMPA1P29218 277 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 DCTP40126 519 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 CD47Q08722 323 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 DCUN1D3Q8IWE4 304 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 FBXO15Q8NCQ5 510 aaPredicted RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 PYCR2Q96C36 320 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 FAM120BQ96EK7 910 aaKnown RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 GTPBP2Q9BX10 602 aaKnown RBP21.73■■□□□ 1.07
USF3-203ENST00000491165 RXFP3Q9NSD7 469 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 DOLKQ9UPQ8 538 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 PCDHB14Q9Y5E9 798 aa21.73■■□□□ 1.07
USF3-203ENST00000491165 LOC100130705A0A1B0GUX0 176 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 STK16O75716 305 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 SERPINA1P01009 418 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 KRT6AP02538 564 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 KRT6BP04259 564 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 HTR1AP08908 422 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 GGT5P36269 586 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 KRT6CP48668 564 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 MAZP56270 477 aaKnown RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 ANKRD34AQ69YU3 496 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 CALHM3Q86XJ0 350 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 ATOH1Q92858 354 aaPredicted RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 COX4I2Q96KJ9 171 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 CPPED1Q9BRF8 314 aaPredicted RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 ATG10Q9H0Y0 220 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 TRIT1Q9H3H1 467 aaKnown RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 SLC6A13Q9NSD5 602 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 STOX2Q9P2F5 926 aaPredicted RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 ORC6Q9Y5N6 252 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 SNX5Q9Y5X3 404 aa21.72■■□□□ 1.07
USF3-203ENST00000491165 EP300Q09472 2414 aaPredicted RBP21.72■■□□□ 1.07
USF3-203ENST00000491165 CLPXO76031 633 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 CLDN9O95484 217 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 HIST1H2AGP0C0S8 130 aaPredicted RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 IL1RNP18510 177 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 HIST1H2ADP20671 130 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 UBE2IP63279 158 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 LRIF1Q5T3J3 769 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 ZNF761Q86XN6 746 aaPredicted RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 OR52E1Q8NGJ3 308 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 ZNF480Q8WV37 535 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 HIST1H2AHQ96KK5 128 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 PRRX2Q99811 253 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 HIST1H2AJQ99878 128 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 H2AFJQ9BTM1 129 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 KCNH6Q9H252 994 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 RAD21L1Q9H4I0 556 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 CPNE7Q9UBL6 633 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 WARS2Q9UGM6 360 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 SNRNP200O75643 2136 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 PCM1Q15154 2024 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 A0A096LPI6 279 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 MYF5P13349 255 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 AP1S2P56377 157 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 VAC14Q08AM6 782 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 PPP1R8Q12972 351 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 SF3A2Q15428 464 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 RFX4Q33E94 735 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 ZNF691Q5VV52 312 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 TMEM179BQ7Z7N9 219 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 TMEM132CQ8N3T6 1108 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 C2orf73Q8N5S3 287 aaPredicted RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 OR9A1PQ8NGU1 263 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 NETO1Q8TDF5 533 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 TRUB1Q8WWH5 349 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 MUL1Q969V5 352 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 MTFMTQ96DP5 389 aaKnown RBP21.71■■□□□ 1.07
USF3-203ENST00000491165 CAMK1GQ96NX5 476 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 CSF3RQ99062 836 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 XKR8Q9H6D3 395 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 MAN2B2Q9Y2E5 1009 aa21.71■■□□□ 1.07
USF3-203ENST00000491165 ANXA5P08758 320 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 MAPK9P45984 424 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 RAD23AP54725 363 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ISL1P61371 349 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 IL18R1Q13478 541 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 HIPK1Q86Z02 1210 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 RAD51AP1Q96B01 352 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 CXorf40BQ96DE9 158 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 FAM210AQ96ND0 272 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ACPTQ9BZG2 426 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 RMND5AQ9H871 391 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 BAG5Q9UL15 447 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 ASXL3Q9C0F0 2248 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 SLC1A7O00341 560 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 KHNYNO15037 678 aaKnown RBP21.7■■□□□ 1.06
USF3-203ENST00000491165 DNAJB5O75953 348 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 AGXTP21549 392 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 PRKACGP22612 351 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 S100A3P33764 101 aa21.7■■□□□ 1.06
USF3-203ENST00000491165 GZMMP51124 257 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms