RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 ITGAMP11215 1152 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 COX7A2P14406 83 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 ENGP17813 658 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 HIST1H2ADP20671 130 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 CCT3P49368 545 aaKnown RBP9.77□□□□□ -0.85
BRD9-209ENST00000490814 FADDQ13158 208 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 SLC14A1Q13336 389 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 PCBP2Q15366 365 aaKnown RBP eCLIP9.77□□□□□ -0.85
BRD9-209ENST00000490814 LTB4RQ15722 352 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 GPR68Q15743 365 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 C21orf62-AS1Q17RA5 79 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 CYP27C1Q4G0S4 372 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 USP39Q53GS9 565 aaKnown RBP9.77□□□□□ -0.85
BRD9-209ENST00000490814 SHQ1Q6PI26 577 aaKnown RBP9.77□□□□□ -0.85
BRD9-209ENST00000490814 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.77□□□□□ -0.853e-6■□□□□ 11.1
BRD9-209ENST00000490814 COMMD7Q86VX2 200 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 RBFAQ8N0V3 343 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 ZNF675Q8TD23 568 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 UFD1Q92890 307 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 HIST1H2AHQ96KK5 128 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 HIST1H2AJQ99878 128 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 SLC30A2Q9BRI3 323 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 H2AFJQ9BTM1 129 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.85
BRD9-209ENST00000490814 M0R082 166 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 M0R129 80 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 FPGTO14772 594 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SYN3O14994 580 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 KIAA0513O60268 411 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ANXA5P08758 320 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SRCP12931 536 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 HNF4AP41235 474 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 KIR3DL1P43629 444 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 HOXA1P49639 335 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 PRKCDQ05655 676 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CHRNA6Q15825 494 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 RSPO2Q6UXX9 243 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 GOT1L1Q8NHS2 421 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 IPCEF1Q8WWN9 437 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 MYDGFQ969H8 173 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MYO19Q96H55 970 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MTERF1Q99551 399 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 C1QTNF3Q9BXJ4 246 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ACPTQ9BZG2 426 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 RANBP3Q9H6Z4 567 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 GPR83Q9NYM4 423 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SAMD4AQ9UPU9 718 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 HSPE1-MOB4S4R3N1 261 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SLC38A8A6NNN8 435 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CLIC1O00299 241 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MTX2O75431 263 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ERN1O75460 977 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 KLKB1P03952 638 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 TNFRSF1BP20333 461 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 POU1F1P28069 291 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 NPRL3Q12980 569 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ZNF273Q14593 569 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 AANATQ16613 207 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 GPR149Q86SP6 731 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 TSPYL5Q86VY4 417 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 CYP4Z2PQ8N1L4 340 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 PTP4A1Q93096 173 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 HSH2DQ96JZ2 352 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MAGEB10Q96LZ2 347 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 CNPPD1Q9BV87 410 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 TRIM45Q9H8W5 580 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 HPF1Q9NWY4 346 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 IL17CQ9P0M4 197 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MBD2Q9UBB5 411 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 PCDHB1Q9Y5F3 818 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SLC22A5O76082 557 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 MNX1P50219 401 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 CRISP3P54108 245 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CXCR4P61073 352 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 VLDLRP98155 873 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 DSC1Q08554 894 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 TTLL9Q3SXZ7 439 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ZC3H12BQ5HYM0 836 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 HECTD3Q5T447 861 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 ZNF648Q5T619 568 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 ZNF605Q86T29 641 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CLECL1Q8IZS7 167 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 GPR156Q8NFN8 814 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 MAL2Q969L2 176 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SGTBQ96EQ0 304 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 APIPQ96GX9 242 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CCDC115Q96NT0 180 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 GTPBP2Q9BX10 602 aaKnown RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 CLMPQ9H6B4 373 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 TAS2R16Q9NYV7 291 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
BRD9-209ENST00000490814 SH3BP4Q9P0V3 963 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 SLC23A1Q9UHI7 598 aa9.76□□□□□ -0.85
BRD9-209ENST00000490814 GLYATL1P3A0A0U1RQE8 302 aa9.75□□□□□ -0.85
BRD9-209ENST00000490814 A0A1B0GVM2 712 aa9.75□□□□□ -0.85
BRD9-209ENST00000490814 TNFRSF21O75509 655 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms