RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 HS6ST1O60243 411 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 CCNT2O60583 730 aaKnown RBP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 TUBB4AP04350 444 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 TPOP07202 933 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 TNNI3P19429 210 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 CERS1P27544 350 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 PPP2R1BP30154 601 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 PTGER1P34995 402 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 GGT5P36269 586 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 GP5P40197 560 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 LIM2P55344 173 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 MRPS25P82663 173 aaKnown RBP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 IRF8Q02556 426 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 DOC2AQ14183 400 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 ELAVL1Q15717 326 aaKnown RBP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 ABHD17CQ6PCB6 329 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 CTAGE3PQ8IX95 158 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 SRFBP1Q8NEF9 429 aaKnown RBP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 CA5BP1Q8WTZ4 195 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 PHF10Q8WUB8 498 aaKnown RBP18.37■□□□□ 0.53
SREBF1-216ENST00000490796 ASB15Q8WXK1 588 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 KIAA1191Q96A73 305 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 ESAMQ96AP7 390 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 QRFPRQ96P65 431 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 TMEM79Q9BSE2 394 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 CACNA1CQ13936 2221 aa18.37■□□□□ 0.53
SREBF1-216ENST00000490796 A0A1B0GTH9 108 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 FAM187AA6NFU0 413 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 TP73O15350 636 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 CTNSO60931 367 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 CD1DP15813 335 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 TFEBP19484 476 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 KCNC1P48547 511 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 HNRNPFP52597 415 aaKnown RBP18.36■□□□□ 0.53
SREBF1-216ENST00000490796 GPR85P60893 370 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 PLGLB1Q02325 96 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 ADPRMQ3LIE5 342 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 PAOXQ6QHF9 649 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 C3orf62Q6ZUJ4 267 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 NCCRP1Q6ZVX7 275 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-216ENST00000490796 RAPH1Q70E73 1250 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 GPALPP1Q8IXQ4 340 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 UBE2E3Q969T4 207 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 SDCCAG3Q96C92 435 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 KCNC2Q96PR1 638 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 F2RL3Q96RI0 385 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 GPR22Q99680 433 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 RBBP8Q99708 897 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 ERP44Q9BS26 406 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 ALOXE3Q9BYJ1 711 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 KCMF1Q9P0J7 381 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 WHRNQ9P202 907 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 DAPP1Q9UN19 280 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 PPIEQ9UNP9 301 aaKnown RBP18.36■□□□□ 0.53
SREBF1-216ENST00000490796 ASB1Q9Y576 335 aa18.36■□□□□ 0.53
SREBF1-216ENST00000490796 NCOA6Q14686 2063 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-216ENST00000490796 CXorf49A8MYA2 514 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-216ENST00000490796 OR2J2O76002 312 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 SSTR2P30874 369 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 SPRP35270 261 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-216ENST00000490796 MSH2P43246 934 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 RAB10P61026 200 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 CHIT1Q13231 466 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 OR4D1Q15615 310 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 IL20RBQ6UXL0 311 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 MDGA2Q7Z553 956 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 CD163Q86VB7 1156 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 TMEM52Q8NDY8 209 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 OR14A16Q8NHC5 309 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 MCMBPQ9BTE3 642 aa18.35■□□□□ 0.53
SREBF1-216ENST00000490796 ZNF223Q9UK11 482 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-216ENST00000490796 ZNF490Q9ULM2 529 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-216ENST00000490796 CCDC168Q8NDH2 2452 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 TEP1Q99973 2627 aaKnown RBP18.34■□□□□ 0.53
SREBF1-216ENST00000490796 MYOCOSA0A1B0GUC4 107 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 TCRBV9S1A1TA0A576 114 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 TGFBR3LH3BV60 316 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 ACOT7O00154 380 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 PDE9AO76083 593 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 GSTA2P09210 222 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 PCNAP12004 261 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 CBLBQ13191 982 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 SERTAD2Q14140 314 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 AP5B1Q2VPB7 878 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 TMEM211Q6ICI0 200 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 ARHGAP11AQ6P4F7 1023 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 CHSY3Q70JA7 882 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 LRRC70Q7Z2Q7 622 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 VN1R5Q7Z5H4 357 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 ZFP62Q8NB50 900 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-216ENST00000490796 PDPRQ8NCN5 879 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 MORN4Q8NDC4 146 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 PSD4Q8NDX1 1056 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 C16orf52Q8NHV5 167 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 STAG3L4Q8TBR4 150 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 CHTF18Q8WVB6 975 aa18.34■□□□□ 0.53
SREBF1-216ENST00000490796 SREK1Q8WXA9 508 aaKnown RBP18.34■□□□□ 0.53
SREBF1-216ENST00000490796 WDR34Q96EX3 536 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms