RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 JUNDP17535 347 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 RELAQ04206 551 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 CAMK1Q14012 370 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 DGUOKQ16854 277 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 C9orf64Q5T6V5 341 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF605Q86T29 641 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 RASGRP3Q8IV61 690 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 HORMAD2Q8N7B1 307 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ANKRD53Q8N9V6 530 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 HTRA1Q92743 480 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 COQ10AQ96MF6 247 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 DYRK4Q9NR20 520 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 CAB39Q9Y376 341 aaPredicted RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 IGLON5A6NGN9 336 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 M0R082 166 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 GPR37L1O60883 481 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 TPP2P29144 1249 aaPredicted RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 BCAP31P51572 246 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 MAPK12P53778 367 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF234Q14588 700 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 WDR53Q7Z5U6 358 aaPredicted RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 OR52N2Q8NGI0 321 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 MCFD2Q8NI22 146 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.99□□□□□ -0.01
BRD9-208ENST00000489816 Q96MT0 163 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PRR14Q9BWN1 585 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF556Q9HAH1 456 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ATAD3AQ9NVI7 634 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF226Q9NYT6 803 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 DEC1Q9P2X7 70 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 TRBV4-1A0A0J9YWV2 114 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PNMA8CA0A1B0GUJ8 204 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PLPP1O14494 284 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF12P17014 697 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 CDH3P22223 829 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PTGES3Q15185 160 aaKnown RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF750Q32MQ0 723 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 TRIM40Q6P9F5 258 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 PRSS48Q7RTY5 328 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ADGRF3Q8IZF5 1079 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 BADQ92934 168 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ZNF566Q969W8 418 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 VPS35Q96QK1 796 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ALPK1Q96QP1 1244 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 OR5M11Q96RB7 305 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 EFCAB11Q9BUY7 163 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 KCNK12Q9HB15 430 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 ACER3Q9NUN7 267 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 TEX10Q9NXF1 929 aaPredicted RBP14.99□□□□□ -0.01
BRD9-208ENST00000489816 INSL6Q9Y581 213 aa14.99□□□□□ -0.01
BRD9-208ENST00000489816 OR2A25A4D2G3 310 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 NPIPB8E9PQR5 432 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 QSOX1O00391 747 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 ADAMDEC1O15204 470 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 SLC22A1O15245 554 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 APOL3O95236 402 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 PAK4O96013 591 aaPredicted RBP14.98□□□□□ -0.01
BRD9-208ENST00000489816 CKMT1AP12532 417 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 TGFBR2P37173 567 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 CLCNKAP51800 687 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 DOC2BQ14184 412 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 PUM1Q14671 1186 aaKnown RBP eCLIP14.98□□□□□ -0.014e-7■■□□□ 11.6
BRD9-208ENST00000489816 TEAD4Q15561 434 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 FAM71E1Q6IPT2 247 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 DYNC2LI1Q8TCX1 351 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 XAGE5Q8WWM1 108 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 CENPOQ9BU64 300 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 BHLHE41Q9C0J9 482 aaPredicted RBP14.98□□□□□ -0.01
BRD9-208ENST00000489816 C5orf58C9J3I9 102 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 TBX1O43435 398 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 OR1F1O43749 312 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 TBX6O95947 436 aaPredicted RBP14.98□□□□□ -0.01
BRD9-208ENST00000489816 FGBP02675 491 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 HSD3B1P14060 373 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 HSD3B2P26439 372 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 GTF2E2P29084 291 aaKnown RBP14.98□□□□□ -0.01
BRD9-208ENST00000489816 ZNF846Q147U1 533 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 NLRP8Q86W28 1048 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 SVOPQ8N4V2 548 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 CHPT1Q8WUD6 406 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 SMG7Q92540 1137 aaKnown RBP14.98□□□□□ -0.01
BRD9-208ENST00000489816 EPYCQ99645 322 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 PADI2Q9Y2J8 665 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 PLEKHM1Q9Y4G2 1056 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 LRRK1Q38SD2 2015 aa14.98□□□□□ -0.01
BRD9-208ENST00000489816 KRBA1A5PL33 1030 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 H3BN98 237 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 PRNPP04156 253 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 C8orf89P0DMQ9 161 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 CNR2P34972 360 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 GGT2P36268 569 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 BMPR1AP36894 532 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 SOX9P48436 509 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 LIM2P55344 173 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 PRMT2P55345 433 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 MICAQ29983 383 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
BRD9-208ENST00000489816 DNAJC22Q8N4W6 341 aa14.97□□□□□ -0.01
BRD9-208ENST00000489816 SLC38A5Q8WUX1 472 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms