RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 UGDHO60701 494 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 MYO1DO94832 1006 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 CRYABP02511 175 aaKnown RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 IFNA16P05015 189 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 CD46P15529 392 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 ATP5A1P25705 553 aaKnown RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 PTX3P26022 381 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 ARL1P40616 181 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 MAGEA12P43365 314 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 RAP1GDS1P52306 607 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 STX4Q12846 297 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 TUBA3CQ13748 450 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 TECRLQ5HYJ1 363 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 TUBA3EQ6PEY2 450 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 UBE3DQ7Z6J8 389 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 SCUBE1Q8IWY4 988 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 LGI4Q8N135 537 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 KIF2BQ8N4N8 673 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 PTGR2Q8N8N7 351 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 ACOT4Q8N9L9 421 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-217ENST00000489719 DNAJB8Q8NHS0 232 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 HUS1BQ8NHY5 278 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 RGMAQ96B86 450 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 OR51B5Q9H339 312 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 ANKRD10Q9NXR5 420 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 FLNCQ14315 2725 aa16.69■□□□□ 0.26
ABCF3-217ENST00000489719 SAP18O00422 153 aaKnown RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 RTCAO00442 366 aaKnown RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 SIX3O95343 332 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 DDAH2O95865 285 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 ABHD2P08910 425 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 HIST1H1TP22492 207 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 EEF1DP29692 281 aaKnown RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 SSR2P43308 183 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 CLCN2P51788 898 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 OR1C1Q15619 314 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 CPSF6Q16630 551 aaKnown RBP eCLIP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 OR4C11Q6IEV9 310 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 GOLGA7Q7Z5G4 137 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 TMEM132CQ8N3T6 1108 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 TMEM52Q8NDY8 209 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 C7orf57Q8NEG2 295 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 PSMG3-AS1Q96PY0 264 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 MTERF1Q99551 399 aaKnown RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 NPAS2Q99743 824 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 MRPL57Q9BQC6 102 aaKnown RBP16.68■□□□□ 0.26
ABCF3-217ENST00000489719 ALOXE3Q9BYJ1 711 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 SLC5A6Q9Y289 635 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 PCDHGB6Q9Y5F9 930 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 DOCK10Q96BY6 2186 aa16.68■□□□□ 0.26
ABCF3-217ENST00000489719 NUP210LQ5VU65 1888 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 H0YIV9 168 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 FCHO1O14526 889 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 MAN1A2O60476 641 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CLDN9O95484 217 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 TNNI3P19429 210 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CPN2P22792 545 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 ST13P50502 369 aaKnown RBP16.67■□□□□ 0.26
ABCF3-217ENST00000489719 HNRNPFP52597 415 aaKnown RBP16.67■□□□□ 0.26
ABCF3-217ENST00000489719 SLAMF1Q13291 335 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 TERF2Q15554 542 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 SPINK14Q6IE38 97 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 ZNF793Q6ZN11 406 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 NR4A3Q92570 626 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 SIGLEC12Q96PQ1 595 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 TAAR6Q96RI8 345 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CSF3RQ99062 836 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 MAPKAP1Q9BPZ7 522 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CCDC77Q9BR77 488 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 NOL11Q9H8H0 719 aaKnown RBP16.67■□□□□ 0.26
ABCF3-217ENST00000489719 ADAP2Q9NPF8 381 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 KLHL1Q9NR64 748 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 XPR1Q9UBH6 696 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 FBXW2Q9UKT8 454 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 OSGIN2Q9Y236 505 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 RNF11Q9Y3C5 154 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 TSC22D4Q9Y3Q8 395 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CLCA3PQ9Y6N3 262 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 CNTRLQ7Z7A1 2325 aa16.67■□□□□ 0.26
ABCF3-217ENST00000489719 STX16-NPEPL1H3BU86 382 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 E2F3O00716 465 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 STX16O14662 325 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 RIPK2O43353 540 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 TLX1P31314 330 aaPredicted RBP16.66■□□□□ 0.26
ABCF3-217ENST00000489719 CYB561P49447 251 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 CCNG1P51959 295 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 MLF1P58340 268 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 RPS13P62277 151 aaKnown RBP16.66■□□□□ 0.26
ABCF3-217ENST00000489719 SERTAD2Q14140 314 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 TEX35Q5T0J7 233 aa16.66■□□□□ 0.26
ABCF3-217ENST00000489719 SLC25A25Q6KCM7 469 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms