RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TBC1D20Q96BZ9 403 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 C8orf44Q96CB5 159 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 SORT1Q99523 831 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 MAPKAP1Q9BPZ7 522 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TGIF2Q9GZN2 237 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 C20orf27Q9GZN8 174 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 VN1R1Q9GZP7 353 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 BRF2Q9HAW0 419 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 EML4Q9HC35 981 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 FBXW2Q9UKT8 454 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 MKL2Q9ULH7 1088 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 HS3ST3B1Q9Y662 390 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TLN1Q9Y490 2541 aaKnown RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 CHD6Q8TD26 2715 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 H3BQF6 201 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 MASP2O00187 686 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 PIP5K1BO14986 540 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 RECKO95980 971 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 JUNP05412 331 aaKnown RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 HEXBP07686 556 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 HSD3B1P14060 373 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 NR1D1P20393 614 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 GRK2P25098 689 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 HSD3B2P26439 372 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 SLC1A6P48664 564 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 RAB38P57729 211 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 BTKQ06187 659 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 TBL3Q12788 808 aaKnown RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 CHAF1BQ13112 559 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 STX3Q13277 289 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 IMPG1Q17R60 797 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 DEFB109BQ30KR1 87 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 RIPOR1Q6ZS17 1223 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 CLNKQ7Z7G1 428 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 DDIASQ8IXT1 998 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 METTL4Q8N3J2 472 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 ZCCHC7Q8N3Z6 543 aaKnown RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF781Q8N8C0 355 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 OR2T11Q8NH01 316 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 OR1F2PQ96R84 312 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 NPLQ9BXD5 320 aaPredicted RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 EBPLQ9BY08 206 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 FAM117AQ9C073 453 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 ROGDIQ9GZN7 287 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 TUBB1Q9H4B7 451 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 PRORYQ9H606 182 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 TEX10Q9NXF1 929 aaPredicted RBP10.41□□□□□ -0.74
UBE4B-210ENST00000488228 GIMAP2Q9UG22 337 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 ZDHHC2Q9UIJ5 367 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 DAPP1Q9UN19 280 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 MAN2B2Q9Y2E5 1009 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 DNAJC15Q9Y5T4 150 aa10.41□□□□□ -0.74
UBE4B-210ENST00000488228 IGHV3-20A0A0C4DH32 117 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 ARHGAP10A1A4S6 786 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 ARGFXA6NJG6 315 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 TGFBR3LH3BV60 316 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 SOCS6O14544 535 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 AIFM1O95831 613 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 CHEK2O96017 543 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 KLK1P06870 262 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 CD63P08962 238 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 LINC00032P0C843 101 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 MAOAP21397 527 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 JAK1P23458 1154 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 MMP11P24347 488 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 TPP2P29144 1249 aaPredicted RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 TSFMP43897 325 aaKnown RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 EMP2P54851 167 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 BTG2P78543 158 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 RHAGQ02094 409 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 TNFRSF17Q02223 184 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 SLAMF1Q13291 335 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 PDCD2Q16342 344 aaPredicted RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 UGT3A2Q3SY77 523 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 SPDYAQ5MJ70 313 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 CYP20A1Q6UW02 462 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 AMER2Q8N7J2 671 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 GBP7Q8N8V2 638 aaPredicted RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 SNRNP27Q8WVK2 155 aaKnown RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 APIPQ96GX9 242 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 DDX31Q9H8H2 851 aaKnown RBP10.4□□□□□ -0.74
UBE4B-210ENST00000488228 LYRM4Q9HD34 91 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 SEMA3GQ9NS98 782 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 PSD3Q9NYI0 1048 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 KCMF1Q9P0J7 381 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 VPS29Q9UBQ0 182 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 FBXL4Q9UKA2 621 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 POLHQ9Y253 713 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 TRAF6Q9Y4K3 522 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 ATG4BQ9Y4P1 393 aa10.4□□□□□ -0.74
UBE4B-210ENST00000488228 CYR61O00622 381 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 PCDH7O60245 1069 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 DNAJB5O75953 348 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 RSL1D1O76021 490 aaKnown RBP10.39□□□□□ -0.75
UBE4B-210ENST00000488228 FAM58BPP0C7Q3 252 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 C8orf89P0DMQ9 161 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 NR2F6P10588 404 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 COX6A1P12074 109 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 ACPPP15309 386 aa10.39□□□□□ -0.75
UBE4B-210ENST00000488228 CPN2P22792 545 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms