RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 ZNF793Q6ZN11 406 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 CLNKQ7Z7G1 428 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 TBC1D1Q86TI0 1168 aaPredicted RBP18.03■□□□□ 0.48
CD55-209ENST00000488171 LURAP1LQ8IV03 231 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 SLC34A3Q8N130 599 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 FAM98AQ8NCA5 519 aaKnown RBP18.03■□□□□ 0.48
CD55-209ENST00000488171 UBTD2Q8WUN7 234 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 NCLNQ969V3 563 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 MS4A8Q9BY19 250 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 KCMF1Q9P0J7 381 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 SUCOQ9UBS9 1254 aaKnown RBP18.03■□□□□ 0.48
CD55-209ENST00000488171 NPIPA1Q9UND3 350 aa18.03■□□□□ 0.48
CD55-209ENST00000488171 SUPT3HB4E1H0 165 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 SUPT3HO75486 399 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 MSH2P43246 934 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 PCDH1Q08174 1060 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 Q6ZPB1 254 aaPredicted RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 CENPLQ8N0S6 344 aaPredicted RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 CPSF7Q8N684 471 aaKnown RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 ZNF473Q8WTR7 871 aaKnown RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 NXNL1Q96CM4 212 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 VMP1Q96GC9 406 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 KCNC2Q96PR1 638 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 COPS7BQ9H9Q2 264 aaPredicted RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 ADAP2Q9NPF8 381 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 ZDHHC18Q9NUE0 388 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 TINAGQ9UJW2 476 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 ENTPD4Q9Y227 616 aa18.02■□□□□ 0.47
CD55-209ENST00000488171 MRPS33Q9Y291 106 aaKnown RBP18.02■□□□□ 0.47
CD55-209ENST00000488171 CACNA1DQ01668 2161 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 MYO7BQ6PIF6 2116 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 HMX2A2RU54 273 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 PRSS44E7EML9 344 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 K7EPI3 171 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 ASNA1O43681 348 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 PRKNO60260 465 aaPredicted RBP18.01■□□□□ 0.47
CD55-209ENST00000488171 MLYCDO95822 493 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 MTHFD2P13995 350 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 IRF9Q00978 393 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 TGM3Q08188 693 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 HIST2H2ACQ16777 129 aaPredicted RBP18.01■□□□□ 0.47
CD55-209ENST00000488171 HIST2H2AA3Q6FI13 130 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 SPPL2CQ8IUH8 684 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 LAS2Q8IYD9 372 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 KCTD4Q8WVF5 259 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 MAGED4Q96JG8 741 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 OPTCQ9UBM4 332 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 FBXW2Q9UKT8 454 aa18.01■□□□□ 0.47
CD55-209ENST00000488171 MYOCOSA0A1B0GUC4 107 aa18■□□□□ 0.47
CD55-209ENST00000488171 TMEM200CA6NKL6 621 aa18■□□□□ 0.47
CD55-209ENST00000488171 RTCAO00442 366 aaKnown RBP18■□□□□ 0.47
CD55-209ENST00000488171 CTNSO60931 367 aa18■□□□□ 0.47
CD55-209ENST00000488171 ITGA10O75578 1167 aa18■□□□□ 0.47
CD55-209ENST00000488171 ATP5A1P25705 553 aaKnown RBP18■□□□□ 0.47
CD55-209ENST00000488171 CASP6P55212 293 aa18■□□□□ 0.47
CD55-209ENST00000488171 ART3Q13508 389 aa18■□□□□ 0.47
CD55-209ENST00000488171 BMPR2Q13873 1038 aa18■□□□□ 0.47
CD55-209ENST00000488171 ELAVL1Q15717 326 aaKnown RBP18■□□□□ 0.47
CD55-209ENST00000488171 MROH9Q5TGP6 573 aa18■□□□□ 0.47
CD55-209ENST00000488171 SP5Q6BEB4 398 aaPredicted RBP18■□□□□ 0.47
CD55-209ENST00000488171 MED27Q6P2C8 311 aa18■□□□□ 0.47
CD55-209ENST00000488171 MTFR2Q6P444 385 aa18■□□□□ 0.47
CD55-209ENST00000488171 MRGPRGQ86SM5 289 aa18■□□□□ 0.47
CD55-209ENST00000488171 TICAM1Q8IUC6 712 aa18■□□□□ 0.47
CD55-209ENST00000488171 CHERPQ8IWX8 916 aaKnown RBP18■□□□□ 0.47
CD55-209ENST00000488171 TMEM125Q96AQ2 219 aa18■□□□□ 0.47
CD55-209ENST00000488171 MAPKAP1Q9BPZ7 522 aa18■□□□□ 0.47
CD55-209ENST00000488171 LRRC1Q9BTT6 524 aa18■□□□□ 0.47
CD55-209ENST00000488171 TBCDQ9BTW9 1192 aa18■□□□□ 0.47
CD55-209ENST00000488171 LYRM4Q9HD34 91 aa18■□□□□ 0.47
CD55-209ENST00000488171 ACOT9Q9Y305 439 aa18■□□□□ 0.47
CD55-209ENST00000488171 ITPR2Q14571 2701 aa18■□□□□ 0.47
CD55-209ENST00000488171 ZNHIT1O43257 154 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 SCELO95171 688 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 TGFB1P01137 390 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 C2P06681 752 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 PCNAP12004 261 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 ZNF24P17028 368 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 GRNP28799 593 aaKnown RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 ADORA2A-AS1P86434 159 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 HSF1Q00613 529 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 RCN2Q14257 317 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 TMEM35AQ53FP2 167 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 UBAP2Q5T6F2 1119 aaKnown RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 C8orf74Q6P047 294 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 RPTNQ6XPR3 784 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 C16orf47Q6ZP98 133 aaPredicted RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 SULF2Q8IWU5 870 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 CYP4Z2PQ8N1L4 340 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 TMEM132CQ8N3T6 1108 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 ZNF808Q8N4W9 903 aaPredicted RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 ACOT4Q8N9L9 421 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 SRFBP1Q8NEF9 429 aaKnown RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 OR7G3Q8NG95 312 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 RHEBL1Q8TAI7 183 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 PTPMT1Q8WUK0 201 aaPredicted RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 UBE2E3Q969T4 207 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 MRRFQ96E11 262 aaKnown RBP17.99■□□□□ 0.47
CD55-209ENST00000488171 ALOXE3Q9BYJ1 711 aa17.99■□□□□ 0.47
CD55-209ENST00000488171 ROGDIQ9GZN7 287 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms