RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 GPR18Q14330 331 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 CAPRIN1Q14444 709 aaKnown RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 SPARCL1Q14515 664 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 RILPL1Q5EBL4 403 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 RAET1GQ6H3X3 334 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ERAP2Q6P179 960 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ZNF474Q6S9Z5 364 aaPredicted RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 ARSKQ6UWY0 536 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ISLR2Q6UXK2 745 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 SHISA6Q6ZSJ9 500 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 DPPA4Q7L190 304 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 TSPAN33Q86UF1 283 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ZNF354CQ86Y25 554 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 HIPK1Q86Z02 1210 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 CCDC65Q8IXS2 484 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 OR4N4Q8N0Y3 316 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 PDILTQ8N807 584 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 WIPF2Q8TF74 440 aaPredicted RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 IGFBPL1Q8WX77 278 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 CPT1BQ92523 772 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 SHC3Q92529 594 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 NUS1Q96E22 293 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 MAGED4Q96JG8 741 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 GDAP1L1Q96MZ0 367 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 GPR137Q96N19 417 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 TUBB2BQ9BVA1 445 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 LHPPQ9H008 270 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ABCG8Q9H221 673 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 CCDC134Q9H6E4 229 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 RETREG1Q9H6L5 497 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ACTR5Q9H9F9 607 aaPredicted RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 POPDC2Q9HBU9 364 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 KCNJ16Q9NPI9 418 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 SLC22A11Q9NSA0 550 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 TRIM10Q9UDY6 481 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 EPHA6Q9UF33 1036 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 A0A087WV62 115 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TRAV17A0A0B4J275 112 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KIR2DS5A0A0G2JLQ3 304 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 A0A0G2JNG1 304 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 C17orf113A0A1B0GUU1 675 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TMEM150CB9EJG8 249 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 FAM72CH0Y354 149 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KIR2DS3K7RE56 304 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 ZNF749O43361 778 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KDELR3O43731 214 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 UGDHO60701 494 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 IGSF6O95976 241 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 CRYABP02511 175 aaKnown RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 SLC2A3P11169 496 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 ZNF30P17039 623 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 CR1P17927 2039 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 XRCC1P18887 633 aaPredicted RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 GRK5P34947 590 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KRT9P35527 623 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 HADHAP40939 763 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 SLC37A1P57057 533 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 NUP107P57740 925 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TAS2R50P59544 299 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 IRX6P78412 446 aaPredicted RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 CUL2Q13617 745 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KIR2DS5Q14953 304 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 KNOP1Q1ED39 458 aaKnown RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 ZNF260Q3ZCT1 412 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 ATPAF1Q5TC12 328 aaPredicted RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 FAM72AQ5TYM5 149 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 AWAT2Q6E213 333 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 ISM2Q6H9L7 571 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 FAM72DQ6L9T8 149 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TMEM270Q6UE05 265 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 LRIG3Q6UXM1 1119 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 B4GALNT4Q76KP1 1039 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 IRF2BP2Q7Z5L9 587 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 FAM72BQ86X60 149 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 GALNT13Q8IUC8 556 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 WDTC1Q8N5D0 677 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 OR52N4Q8NGI2 321 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 OR2Y1Q8NGV0 311 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 PTERQ96BW5 349 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 EID2BQ96D98 161 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 DTD2Q96FN9 168 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TRIM51Q9BSJ1 452 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 WDR12Q9GZL7 423 aaKnown RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 BLZF1Q9H2G9 400 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 UCK1Q9HA47 277 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 SLC40A1Q9NP59 571 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 ACP6Q9NPH0 428 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 BEX4Q9NWD9 120 aaPredicted RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 COQ3Q9NZJ6 369 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 FBXO2Q9UK22 296 aaPredicted RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 NOCTQ9UK39 431 aaKnown RBP4.08□□□□□ -1.76
CNN3-206ENST00000487539 WDR37Q9Y2I8 494 aa4.08□□□□□ -1.76
CNN3-206ENST00000487539 TRBV5-3A0A0A0MS03 114 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 MBD3L5A6NJ08 208 aaPredicted RBP4.07□□□□□ -1.76
CNN3-206ENST00000487539 SLC9B1P1A6NJY1 282 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 AQP12BA6NM10 295 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 EFCAB8A8MWE9 144 aa4.07□□□□□ -1.76
CNN3-206ENST00000487539 CLDN4O14493 209 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms