RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MIEF2Q96C03 454 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 PPCDCQ96CD2 204 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 ZNF717Q9BY31 904 aaPredicted RBP13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 EXO1Q9UQ84 846 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 LRRC42Q9Y546 428 aa13.89□□□□□ -0.19
POLR2J3-204ENST00000486319 ASPMQ8IZT6 3477 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 LY6G6EA0A0G2JKS1 128 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 CPED1A4D0V7 1026 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 LRIT2A6NDA9 550 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 C2orf74A8MZ97 194 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM220BPB1ANY3 271 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ZW10O43264 779 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 KLHL18O94889 574 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 SERPIND1P05546 499 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 GSNP06396 782 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 PSMA4P25789 261 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 OR4D2P58180 307 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 RPS15AP62244 130 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 TRA2BP62995 288 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ABHD18Q0P651 414 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 HEPACAMQ14CZ8 416 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 MTX3Q5HYI7 312 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 GLYATQ6IB77 296 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 OR4C11Q6IEV9 310 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ANKRD26P1Q6NSI1 321 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 PAQR7Q86WK9 346 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 TMPRSS12Q86WS5 348 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM20CQ8IXL6 584 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 SRFBP1Q8NEF9 429 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM46DQ8NEK8 389 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 OR10A6Q8NH74 314 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 SLC37A2Q8TED4 501 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ZDHHC1Q8WTX9 485 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 DNAJC9Q8WXX5 260 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM120BQ96EK7 910 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 OR2A14Q96R47 310 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 PIF1Q9H611 641 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 KAT8Q9H7Z6 458 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 DDX31Q9H8H2 851 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 SLC6A13Q9NSD5 602 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 CCM2LQ9NUG4 571 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ARMC1Q9NVT9 282 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 ACTR10Q9NZ32 417 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 PCDHGB4Q9UN71 923 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 U3KQA8 63 aa13.88□□□□□ -0.19
POLR2J3-204ENST00000486319 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 ELOVL7A1L3X0 281 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 FAM149AA5PLN7 773 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 OR6C74A6NCV1 312 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GSTA4O15217 222 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 TBX19O60806 448 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 CPSF4O95639 269 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GP1BAP07359 652 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 IL3P08700 152 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 UGT2B7P16662 529 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GGT1P19440 569 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 IL10P22301 178 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 PPIBP23284 216 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 KLC1Q07866 573 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 TRIP10Q15642 601 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 ADPRMQ3LIE5 342 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 ZNF621Q6ZSS3 439 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 SLC35F3Q8IY50 421 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 ARL10Q8N8L6 244 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 FLVCR1-AS1Q8TAF5 88 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 IFI44Q8TCB0 444 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 PATE1Q8WXA2 126 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 NSMCE2Q96MF7 247 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 SORBS1Q9BX66 1292 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 IKZF5Q9H5V7 419 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 COPS7BQ9H9Q2 264 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 ZNF282Q9UDV7 671 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 RIMS3Q9UJD0 308 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 CORO2BQ9UQ03 480 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GMEB1Q9Y692 573 aa13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-204ENST00000486319 GSAPA4D1B5 854 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 OR2A25A4D2G3 310 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 EME2A4GXA9 379 aaPredicted RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 CLIC1O00299 241 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 RTCAO00442 366 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 HNRNPRO43390 633 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 PEX1O43933 1283 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 B3GALT4O96024 378 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 NCK1P16333 377 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 POLR2CP19387 275 aaPredicted RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 DDCP20711 480 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 TSFMP43897 325 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 STXBP1P61764 594 aaKnown RBP13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 MC1RQ01726 317 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 HHEXQ03014 270 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 TGM3Q08188 693 aa13.86□□□□□ -0.19
POLR2J3-204ENST00000486319 TAF11Q15544 211 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms