RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 RPS17P08708 135 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 RBP1P09455 135 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 SLC35G6P0C7Q6 338 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PLA2G2AP14555 144 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 EPHA1P21709 976 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 FBLP22087 321 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 PPP2R1BP30154 601 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 CASRP41180 1078 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PIK3CBP42338 1070 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MSH2P43246 934 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TSFMP43897 325 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 GLRBP48167 497 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 NR0B1P51843 470 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 RRADP55042 308 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 SLC18A2Q05940 514 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 C19orf57Q0VDD7 668 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TRAF3Q13114 568 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 AIMP2Q13155 320 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 LAPTM5Q13571 262 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PCOLCEQ15113 449 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PDK4Q16654 411 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TSNAXIP1Q2TAA8 658 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 GGTA1PQ4G0N0 100 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TAF1BQ53T94 588 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 TNFAIP8L3Q5GJ75 292 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TCHHL1Q5QJ38 904 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 LIPJQ5W064 366 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MRM1Q6IN84 353 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 GRHL2Q6ISB3 625 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ABHD17CQ6PCB6 329 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 CLEC18BQ6UXF7 455 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 QSOX2Q6ZRP7 698 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TMPRSS11BQ86T26 416 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 SCUBE1Q8IWY4 988 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 DMRTC2Q8IXT2 367 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 RBMXL3Q8N7X1 1067 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 CLEC18CQ8NCF0 446 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 NFAM1Q8NET5 270 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 FDCSPQ8NFU4 85 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MYRIPQ8NFW9 859 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 OR7G3Q8NG95 312 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 OR52B6Q8NGF0 335 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 OR51Q1Q8NH59 317 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ZCCHC10Q8TBK6 192 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 WDR20Q8TBZ3 569 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 EXT2Q93063 718 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TSLPQ969D9 159 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 CAVIN3Q969G5 261 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 GAL3ST3Q96A11 431 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MIEF2Q96C03 454 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MMABQ96EY8 250 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 C11orf24Q96F05 449 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 CABS1Q96KC9 395 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 FER1L6-AS2Q96M78 137 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 FRMD6Q96NE9 622 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MRPL57Q9BQC6 102 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 SORBS1Q9BX66 1292 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 MS4A8Q9BY19 250 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TRIM4Q9C037 500 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 VN1R1Q9GZP7 353 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 SOX17Q9H6I2 414 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 NDOR1Q9UHB4 597 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ADGRE2Q9UHX3 823 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ANAPC2Q9UJX6 822 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ZNF223Q9UK11 482 aaPredicted RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 PCTPQ9UKL6 214 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 RNF112Q9ULX5 631 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TMCO1Q9UM00 188 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 NTNG1Q9Y2I2 539 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 NAALAD2Q9Y3Q0 740 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TNPO3Q9Y5L0 923 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 CELSR2Q9HCU4 2923 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 KIAA1549Q9HCM3 1950 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 DOCK7Q96N67 2140 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 ITPR2Q14571 2701 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 A0A096LPE4 126 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 IGHV3-20A0A0C4DH32 117 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 EXOC1LA0A1B0GW35 172 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 A0A1W2PPZ6 126 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TCRBV16S1A1N1A0A5B0 115 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 ARGFXA6NJG6 315 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 WASHC1A8K0Z3 465 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 A8MT66 165 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MAGEB17A8MXT2 336 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 POC1B-GALNT4F8VUJ3 575 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 G3V2L1 256 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MKRN2OSH3BPM6 223 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 SGK494L7N484 410 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 FOXE1O00358 373 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 NDUFS4O43181 175 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CHST10O43529 356 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 ZNF354AO60765 605 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 FHP07954 510 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 ZNF16P17020 682 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 SERPINB1P30740 379 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 HSD17B3P37058 310 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 HNF4AP41235 474 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 XCR1P46094 333 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 AVPR1BP47901 424 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms