RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SLC5A11Q8WWX8 675 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PYDC1Q8WXC3 89 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 VPS33AQ96AX1 596 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 SH3KBP1Q96B97 665 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 IL17FQ96PD4 163 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 GPATCH1Q9BRR8 931 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 SGPP1Q9BX95 441 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ACPTQ9BZG2 426 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 EHD1Q9H4M9 534 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 SIDT1Q9NXL6 827 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 SLC39A1Q9NY26 324 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 C6orf203Q9P0P8 240 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 ABCD2Q9UBJ2 740 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 VPS29Q9UBQ0 182 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PACSIN3Q9UKS6 424 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 RUVBL1Q9Y265 456 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 C15orf41Q9Y2V0 281 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 HEBP2Q9Y5Z4 205 aa6.61□□□□□ -1.35
BRCA1-216ENST00000484087 MRPS18BQ9Y676 258 aaKnown RBP6.61□□□□□ -1.35
BRCA1-216ENST00000484087 PIEZO2Q9H5I5 2752 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 GSAPA4D1B5 854 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR5K3A6NET4 321 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR5K4A6NMS3 321 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 C9JVG2 144 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 RRP8O43159 456 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 HCRTR1O43613 425 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SORBS2O94875 1100 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 C9P02748 559 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CTSBP07858 339 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 BCKDHAP12694 445 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 HSD17B1P14061 328 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 FOLR1P15328 257 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PRPS1L1P21108 318 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 S100A3P33764 101 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ASMTP46597 345 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ERFP50548 548 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NEK2P51955 445 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CLDN8P56748 225 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 EEFSECP57772 596 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TAP2Q03519 686 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 EIF3IQ13347 325 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PWP1Q13610 501 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLBPQ14493 270 aaKnown RBP eCLIP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PTGR1Q14914 329 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TAF11Q15544 211 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 GPR19Q15760 415 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ZXDCQ2QGD7 858 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 DEFB110Q30KQ9 67 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 FAM174BQ3ZCQ3 159 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 C6orf10Q5SRN2 563 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WLSQ5T9L3 541 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ATP1A1-AS1Q5TC04 95 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 FAM69BQ5VUD6 431 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CAPRIN2Q6IMN6 1127 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NOXRED1Q6NXP6 359 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WDR74Q6RFH5 385 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PCSK4Q6UW60 755 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NXPE4Q6UWF7 544 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WASH2PQ6VEQ5 465 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TIPARPQ7Z3E1 657 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 C17orf64Q86WR6 236 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AGBL5Q8NDL9 886 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CATSPER1Q8NEC5 780 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TNIP2Q8NFZ5 429 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 DNAJB14Q8TBM8 379 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WDR20Q8TBZ3 569 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SLC13A3Q8WWT9 602 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 DNAJC9Q8WXX5 260 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SMPDL3AQ92484 453 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WDR34Q96EX3 536 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 TEX37Q96LM6 180 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR4K3Q96R72 315 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 OR6C1Q96RD1 312 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PRPF18Q99633 342 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PRORYQ9H606 182 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CLMPQ9H6B4 373 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 KIR3DX1Q9H7L2 352 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AKIRIN1Q9H9L7 192 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 WASH6PQ9NQA3 447 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 HRASLS2Q9NWW9 162 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 SPHK1Q9NYA1 384 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AHSPQ9NZD4 102 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CD300AQ9UGN4 299 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ADGRE2Q9UHX3 823 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ICKQ9UPZ9 632 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 KLHL20Q9Y2M5 609 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CACNA1GO43497 2377 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 CCDC88CQ9P219 2028 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PRORSD1PA6NEY8 169 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 AQP12BA6NM10 295 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 FOXE1O00358 373 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ANKRD28O15084 1053 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ICMTO60725 284 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 ERN1O75460 977 aaKnown RBP6.6□□□□□ -1.35
BRCA1-216ENST00000484087 PGRP06401 933 aa6.6□□□□□ -1.35
BRCA1-216ENST00000484087 LIPCP11150 499 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms