RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ZNF793Q6ZN11 406 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 TMPRSS9Q7Z410 1059 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 ARPINQ7Z6K5 226 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 SNX32Q86XE0 403 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 PPP1R3BQ86XI6 285 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 ARHGAP24Q8N264 748 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 TANKQ92844 425 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 PPCDCQ96CD2 204 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 ITCHQ96J02 903 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 DPH2Q9BQC3 489 aaPredicted RBP9.63□□□□□ -0.87
USP39-215ENST00000481409 DUSP26Q9BV47 211 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 SYNDIG1Q9H7V2 258 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 SYNPO2LQ9H987 977 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 ACSS1Q9NUB1 689 aaPredicted RBP9.63□□□□□ -0.87
USP39-215ENST00000481409 IRAK4Q9NWZ3 460 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 BAIAP2L1Q9UHR4 511 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 BTNL2Q9UIR0 455 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 MRPS33Q9Y291 106 aaKnown RBP9.63□□□□□ -0.87
USP39-215ENST00000481409 MAN2B2Q9Y2E5 1009 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 PCDHA9Q9Y5H5 950 aa9.63□□□□□ -0.87
USP39-215ENST00000481409 ASCC3Q8N3C0 2202 aaKnown RBP9.63□□□□□ -0.87
USP39-215ENST00000481409 OTOGLQ3ZCN5 2332 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ADAMTS20P59510 1910 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 LOC100653049A0A140TA62 436 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 PRSS51A0A1B0GVH4 220 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 A0A1B0GX78 115 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 GABRR3A8MPY1 467 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 RTCAO00442 366 aaKnown RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 TMPRSS11DO60235 418 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 SH3BGRLO75368 114 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ERN1O75460 977 aaKnown RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 KRT34O76011 436 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 SLITRK5O94991 958 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 CBX6O95503 412 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 CYC1P08574 325 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 IL3P08700 152 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 CD63P08962 238 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ZCCHC18P0CG32 403 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 NR2F6P10588 404 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 RNH1P13489 461 aaKnown RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 CPN2P22792 545 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 IL12AP29459 219 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 FRKP42685 505 aaPredicted RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 LIM2P55344 173 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 TNFRSF17Q02223 184 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 NHLH1Q02575 133 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ACTN3Q08043 901 aaPredicted RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 TLR1Q15399 786 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 GPR19Q15760 415 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 UGT8Q16880 541 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 DEFB110Q30KQ9 67 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 VPS26BQ4G0F5 336 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 NDUFAF5Q5TEU4 345 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 FAM219BQ5XKK7 198 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 OR52E8Q6IFG1 317 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 GK5Q6ZS86 529 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 PGAM4Q8N0Y7 254 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 OR9I1Q8NGQ6 314 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 OR1L3Q8NH93 324 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ZFP28Q8NHY6 868 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 ZBED6CLQ96FA7 236 aaPredicted RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 EGLN2Q96KS0 407 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 TEX37Q96LM6 180 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 C10orf90Q96M02 699 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 LRFN5Q96NI6 719 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 OR1F2PQ96R84 312 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 OR52E6Q96RD3 313 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 SH3GL1Q99961 368 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 BTBD10Q9BSF8 475 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 LRMDAQ9H2I8 198 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 NEUROD4Q9HD90 331 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 RYDENQ9NUL5 291 aaKnown RBP9.62□□□□□ -0.87
USP39-215ENST00000481409 GIMAP4Q9NUV9 329 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 KCMF1Q9P0J7 381 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 PCDHGB4Q9UN71 923 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 NAALAD2Q9Y3Q0 740 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 GMEB1Q9Y692 573 aa9.62□□□□□ -0.87
USP39-215ENST00000481409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 CFAP73A6NFT4 308 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 B2RBV5 119 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 C4orf51C9J302 202 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 CLDN4O14493 209 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 MRASO14807 208 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 POLR1CO15160 346 aaPredicted RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 GYG2O15488 501 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 HCRTR1O43613 425 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 FOXS1O43638 330 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 DNAJA2O60884 412 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 KCNH1O95259 989 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 BMP10O95393 424 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 CAPN3P20807 821 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 PPIBP23284 216 aaKnown RBP9.61□□□□□ -0.87
USP39-215ENST00000481409 CERS1P27544 350 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 MAGEA8P43361 318 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 NME5P56597 212 aa9.61□□□□□ -0.87
USP39-215ENST00000481409 MXRA7P84157 204 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms