RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
NDC1-202ENST00000480952 CLCA1A8K7I4 914 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 H7C1Q1 480 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 EIF3FO00303 357 aaPredicted RBP12.36□□□□□ -0.43
NDC1-202ENST00000480952 CLDN4O14493 209 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 IFNA16P05015 189 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 SMIM10L1P0DMW3 83 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 AHRP35869 848 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 BTN3A2P78410 334 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 PPP2R2BQ00005 443 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 FOXO1Q12778 655 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 CSHL1Q14406 222 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 CATSPEREQ5SY80 951 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 LRRC8EQ6NSJ5 796 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 SEM1Q6ZVN7 128 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 MAATS1Q7Z4T9 603 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 DENND6AQ8IWF6 608 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 SCUBE1Q8IWY4 988 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 ULK2Q8IYT8 1036 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 TMEM132CQ8N3T6 1108 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 FBXW8Q8N3Y1 598 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 GOLM1Q8NBJ4 401 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 NAXEQ8NCW5 288 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 TRPV3Q8NET8 790 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 EEF1AKMT1Q8WVE0 214 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 SMIM10Q96HG1 83 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 COX4I2Q96KJ9 171 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 KLHL31Q9H511 634 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 ADAP2Q9NPF8 381 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
NDC1-202ENST00000480952 ZNF629Q9UEG4 869 aaPredicted RBP12.36□□□□□ -0.43
NDC1-202ENST00000480952 PCDHGB3Q9Y5G1 929 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
NDC1-202ENST00000480952 PABPN1LA6NDY0 278 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 SMAD7O15105 426 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 ENDOUP21128 410 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 RGS4P49798 205 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 HK2P52789 917 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 HSD17B7P56937 341 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 SP140Q13342 867 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 DHX34Q14147 1143 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 RBBP5Q15291 538 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 POU4F3Q15319 338 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 TOR1AIP1Q5JTV8 583 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 Q5PR19 223 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 OPN5Q6U736 354 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 VWA5B2Q8N398 1253 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 SIMC1Q8NDZ2 872 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 HES6Q96HZ4 224 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 FAR2Q96K12 515 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 OR4K3Q96R72 315 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 SPNS1Q9H2V7 528 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 TRMT1Q9NXH9 659 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 ARL15Q9NXU5 204 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 TRMT6Q9UJA5 497 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.35□□□□□ -0.43
NDC1-202ENST00000480952 COL6A5A8TX70 2615 aa12.35□□□□□ -0.43
NDC1-202ENST00000480952 FBN1P35555 2871 aaKnown RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 CTAGE15A4D2H0 777 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 AHRRA9YTQ3 701 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 GOSR1O95249 250 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 EPPINO95925 133 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 IL2RAP01589 272 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CCL3P10147 92 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 SAT1P21673 171 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CEACAM8P31997 349 aaPredicted RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 PIGAP37287 484 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 TERF1P54274 439 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CDK16Q00536 496 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 RUNX2Q13950 521 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 ELAVL1Q15717 326 aaKnown RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 BBS9Q3SYG4 887 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 UGT3A1Q6NUS8 523 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CTAGE6Q86UF2 777 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 MYO1HQ8N1T3 1032 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 LIX1Q8N485 282 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 ANKRD53Q8N9V6 530 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 OR5L2Q8NGL0 311 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 OR56A3Q8NH54 315 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 SLC5A11Q8WWX8 675 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 DAZLQ92904 295 aaKnown RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 KIAA1191Q96A73 305 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 BDH2Q9BUT1 245 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
NDC1-202ENST00000480952 MRPS33Q9Y291 106 aaKnown RBP12.34□□□□□ -0.43
NDC1-202ENST00000480952 INAFM1C9JVW0 142 aa12.33□□□□□ -0.44
NDC1-202ENST00000480952 TGFBR3LH3BV60 316 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms