RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PITHD1Q9GZP4 211 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 LIN28AQ9H9Z2 209 aaKnown RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ADAP2Q9NPF8 381 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 WHRNQ9P202 907 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF223Q9UK11 482 aaPredicted RBP14.21□□□□□ -0.13
LIMS3-203ENST00000480744 RNF112Q9ULX5 631 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 ERVK-11Q9UQG0 969 aa14.21□□□□□ -0.13
LIMS3-203ENST00000480744 TCRBV9S1A1TA0A576 114 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 FAM187AA6NFU0 413 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 RAD51CO43502 376 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 PRAMEF4O60810 478 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ZFAND5O76080 213 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 CLDN14O95500 239 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 AGAP20933 346 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 PTGER4P35408 488 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 GGT5P36269 586 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 GMPRP36959 345 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 GP5P40197 560 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 MSH2P43246 934 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 LIM2P55344 173 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 IRF8Q02556 426 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 RCN2Q14257 317 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 SLMAPQ14BN4 828 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 CDSNQ15517 529 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 HIST2H2ACQ16777 129 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ADPRMQ3LIE5 342 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 PRAMEF9Q5VWM5 478 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 HIST2H2AA3Q6FI13 130 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ABHD17CQ6PCB6 329 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 C16orf47Q6ZP98 133 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-203ENST00000480744 MDGA2Q7Z553 956 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 FGD2Q7Z6J4 655 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 CCDC25Q86WR0 208 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 DOLPP1Q86YN1 238 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ARMC10Q8N2F6 343 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 MTFMTQ96DP5 389 aaKnown RBP14.2□□□□□ -0.14
LIMS3-203ENST00000480744 EFCAB11Q9BUY7 163 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 EHD1Q9H4M9 534 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 KCMF1Q9P0J7 381 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF490Q9ULM2 529 aaPredicted RBP14.2□□□□□ -0.14
LIMS3-203ENST00000480744 DAPP1Q9UN19 280 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ASB1Q9Y576 335 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 CLDN16Q9Y5I7 305 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 CLCA3PQ9Y6N3 262 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 ZNF407Q9C0G0 2248 aa14.2□□□□□ -0.14
LIMS3-203ENST00000480744 A0A1B0GTH9 108 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 FAM159BA6NKW6 160 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 A8MVJ9 347 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 C19orf84I3L1E1 186 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 EIF3HO15372 352 aaKnown RBP eCLIP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 HS6ST1O60243 411 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PRKNO60260 465 aaPredicted RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 SH3BGRLO75368 114 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 TBX6O95947 436 aaPredicted RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 TPOP07202 933 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 TNNI3P19429 210 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 CD22P20273 847 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 RAB10P61026 200 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 STX4Q12846 297 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 CBLBQ13191 982 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 CHIT1Q13231 466 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 LAPTM5Q13571 262 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 ELAVL1Q15717 326 aaKnown RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PAGE2BQ5JRK9 111 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 CDKL4Q5MAI5 379 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 C3orf62Q6ZUJ4 267 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 RAPH1Q70E73 1250 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 MAATS1Q7Z4T9 603 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 CHERPQ8IWX8 916 aaKnown RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 EID3Q8N140 333 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 TMEM132CQ8N3T6 1108 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PPM1NQ8N819 430 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PDPRQ8NCN5 879 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 ASB15Q8WXK1 588 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 ALG9Q9H6U8 611 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 TIMMDC1Q9NPL8 285 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 HPF1Q9NWY4 346 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PPT2Q9UMR5 302 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 PPIEQ9UNP9 301 aaKnown RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 YARS2Q9Y2Z4 477 aaKnown RBP14.19□□□□□ -0.14
LIMS3-203ENST00000480744 DNAJC13O75165 2243 aa14.19□□□□□ -0.14
LIMS3-203ENST00000480744 SUPT3HB4E1H0 165 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 E9PLN8 166 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 WWP2O00308 870 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 RTCAO00442 366 aaKnown RBP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CYR61O00622 381 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 CTNSO60931 367 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 SUPT3HO75486 399 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 FAM155BO75949 473 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 OR2J2O76002 312 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PDE9AO76083 593 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 TUBB4AP04350 444 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PCNAP12004 261 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 TFEBP19484 476 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 SPRP35270 261 aaPredicted RBP14.18□□□□□ -0.14
LIMS3-203ENST00000480744 PTGS2P35354 604 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 KCNC1P48547 511 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 GPR143P51810 404 aa14.18□□□□□ -0.14
LIMS3-203ENST00000480744 GPX6P59796 221 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms