RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TP53TG3Q9ULZ0 132 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 SH3GLB1Q9Y371 365 aa4.04□□□□□ -1.76
CALD1-219ENST00000480638 TRBV5-4A0A0C4DH59 114 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 SRRM4A7MD48 611 aaKnown RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 B4GAT1O43505 415 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 GPRIN2O60269 458 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 OR6B1O95007 311 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 LETM1O95202 739 aaPredicted RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 CENPBP07199 599 aaPredicted RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 RPL9P32969 192 aaKnown RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 SLC3A1Q07837 685 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 RBBP4Q09028 425 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 ITPK1Q13572 414 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 PEX6Q13608 980 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 SCARB2Q14108 478 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 ECSCRQ19T08 205 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 NHSL2Q5HYW2 709 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 MUC21Q5SSG8 566 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 SEL1L3Q68CR1 1132 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 NEPROQ6NW34 567 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 REG3GQ6UW15 175 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 NHLRC1Q6VVB1 395 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 MARCH9Q86YJ5 346 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 AQP12AQ8IXF9 295 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 OR8H3Q8N146 312 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 RTL3Q8N8U3 475 aaKnown RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 SUMF1Q8NBK3 374 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 UBLCP1Q8WVY7 318 aaPredicted RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 RBM24Q9BX46 236 aaKnown RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 TRIM7Q9C029 511 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 LRRCC1Q9C099 1032 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 S100A14Q9HCY8 104 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 UBE2TQ9NPD8 197 aaPredicted RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.76
CALD1-219ENST00000480638 GPR83Q9NYM4 423 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 THYN1Q9P016 225 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 ETV7Q9Y603 341 aa4.03□□□□□ -1.76
CALD1-219ENST00000480638 FBP2O00757 339 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 TXNL1O43396 289 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 RENP00797 406 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 IGHG1P01857 330 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 MELTFP08582 738 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 GP9P14770 177 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 GJB2P29033 226 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 FRKP42685 505 aaPredicted RBP4.02□□□□□ -1.77
CALD1-219ENST00000480638 PEX3P56589 373 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 AGAP7PQ5VUJ5 663 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 TMEM64Q6YI46 380 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 SIGLEC15Q6ZMC9 328 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 TMUB2Q71RG4 321 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 FBXL16Q8N461 479 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 BANPQ8N9N5 519 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 GPR148Q8TDV2 347 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 IDI2Q9BXS1 227 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 NMUR1Q9HB89 426 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 SEPT10Q9P0V9 454 aa4.02□□□□□ -1.77
CALD1-219ENST00000480638 ZNF346Q9UL40 294 aaKnown RBP4.02□□□□□ -1.77
CALD1-219ENST00000480638 KIAA1217Q5T5P2 1943 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 LOC390937A0A1W2PQ73 354 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 GTPBP10A4D1E9 387 aaKnown RBP4.01□□□□□ -1.77
CALD1-219ENST00000480638 IGLON5A6NGN9 336 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 SDR42E2A6NKP2 422 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 H0YIG0 161 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 M0R296 226 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 SH3BGRLO75368 114 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 CALCAP01258 141 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 MEP1BQ16820 701 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 AGAP6Q5VW22 663 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 LYPLAL1Q5VWZ2 237 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 LEMD1Q68G75 181 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 HOOK3Q86VS8 718 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 TBC1D10CQ8IV04 446 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 OR1B1Q8NGR6 318 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 SNRNP40Q96DI7 357 aaKnown RBP4.01□□□□□ -1.77
CALD1-219ENST00000480638 ZNF274Q96GC6 653 aaPredicted RBP4.01□□□□□ -1.77
CALD1-219ENST00000480638 RCHY1Q96PM5 261 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 ADPGKQ9BRR6 497 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 CUEDC2Q9H467 287 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 ZNF665Q9H7R5 613 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 MED17Q9NVC6 651 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 GTF3C4Q9UKN8 822 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 SPATA2Q9UM82 520 aa4.01□□□□□ -1.77
CALD1-219ENST00000480638 NIP7Q9Y221 180 aaKnown RBP eCLIP4.01□□□□□ -1.77
CALD1-219ENST00000480638 SALL1Q9NSC2 1324 aa4□□□□□ -1.77
CALD1-219ENST00000480638 A0A1B0GTH9 108 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ZNF840PA6NDX5 716 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ZNF354AO60765 605 aaPredicted RBP4□□□□□ -1.77
CALD1-219ENST00000480638 NME6O75414 186 aaPredicted RBP4□□□□□ -1.77
CALD1-219ENST00000480638 RAD51DO75771 328 aa4□□□□□ -1.77
CALD1-219ENST00000480638 SLC16A8O95907 504 aa4□□□□□ -1.77
CALD1-219ENST00000480638 GH1P01241 217 aa4□□□□□ -1.77
CALD1-219ENST00000480638 SLC1A4P43007 532 aa4□□□□□ -1.77
CALD1-219ENST00000480638 RPS27AP62979 156 aaKnown RBP4□□□□□ -1.77
CALD1-219ENST00000480638 ARHGAP1Q07960 439 aa4□□□□□ -1.77
CALD1-219ENST00000480638 FASTKQ14296 549 aaKnown RBP4□□□□□ -1.77
CALD1-219ENST00000480638 ACKR1Q16570 336 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ANKRD20A4Q4UJ75 823 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ANKRD20A8PQ5CZ79 823 aa4□□□□□ -1.77
CALD1-219ENST00000480638 ANKRD20A2Q5SQ80 823 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms