RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PDE7AQ13946 482 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 DPY19L1Q2PZI1 675 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 CPTPQ5TA50 214 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 GLRX5Q86SX6 157 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 RETREG3Q86VR2 466 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 TICAM1Q8IUC6 712 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 DTWD1Q8N5C7 304 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 EFCAB3Q8N7B9 438 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 AGBL5Q8NDL9 886 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 FBXO27Q8NI29 283 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 UCN3Q969E3 161 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 PPCDCQ96CD2 204 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 COQ8BQ96D53 544 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 MTERF3Q96E29 417 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 OR52E6Q96RD3 313 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 FAIM2Q9BWQ8 316 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 MIEF1Q9NQG6 463 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 SH3BP4Q9P0V3 963 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 LEF1Q9UJU2 399 aaPredicted RBP16.64■□□□□ 0.25
UPF3A-206ENST00000480362 RARRES3Q9UL19 164 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 VPS13AQ96RL7 3174 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 DMDP11532 3685 aa16.64■□□□□ 0.25
UPF3A-206ENST00000480362 ZNF749O43361 778 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 RDH16O75452 317 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 NSA2O95478 260 aaKnown RBP16.63■□□□□ 0.25
UPF3A-206ENST00000480362 LAMP1P11279 417 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 DRD2P14416 443 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 CPN2P22792 545 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PTPN4P29074 926 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 CCKBRP32239 447 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 KIR3DL1P43629 444 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 GCGRP47871 477 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 AVPR1BP47901 424 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 LIM2P55344 173 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 SKP1P63208 163 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 ART3Q13508 389 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 ZNF385BQ569K4 471 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PAGE3Q5JUK9 113 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 NDUFAF5Q5TEU4 345 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PRAMEF17Q5VTA0 474 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 C18orf63Q68DL7 685 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 OR4F3Q6IEY1 312 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 NIPAL1Q6NVV3 410 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 SLC2A7Q6PXP3 512 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 CAMKMTQ7Z624 323 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 CA13Q8N1Q1 262 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 RBM15BQ8NDT2 890 aaKnown RBP16.63■□□□□ 0.25
UPF3A-206ENST00000480362 OR8J2Q8NGG1 315 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 OR5T3Q8NGG3 340 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 NDC1Q9BTX1 674 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 DUSP26Q9BV47 211 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
UPF3A-206ENST00000480362 LYRM4Q9HD34 91 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 TAS2R1Q9NYW7 299 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 MAP10Q9P2G4 905 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PHF11Q9UIL8 331 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 DAPP1Q9UN19 280 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PCDHA9Q9Y5H5 950 aa16.63■□□□□ 0.25
UPF3A-206ENST00000480362 PGRMC2O15173 223 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 HYAL3O43820 417 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 TBX19O60806 448 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 AIFM1O95831 613 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 ALAS2P22557 587 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 NUDT2P50583 147 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 ARSFP54793 590 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 WNT3P56703 355 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 CLDN6P56747 220 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 SLC25A3Q00325 362 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 PRSS53Q2L4Q9 553 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 COQ5Q5HYK3 327 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 YOD1Q5VVQ6 348 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 CDCP2Q5VXM1 449 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 SLCO6A1Q86UG4 719 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 MMABQ96EY8 250 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 BTBD10Q9BSF8 475 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 BHLHE41Q9C0J9 482 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 ATAD3AQ9NVI7 634 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 MS4A12Q9NXJ0 267 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 NDOR1Q9UHB4 597 aa16.62■□□□□ 0.25
UPF3A-206ENST00000480362 COL27A1Q8IZC6 1860 aaPredicted RBP16.62■□□□□ 0.25
UPF3A-206ENST00000480362 C1orf226A1L170 272 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 GLOD5A6NK44 160 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 WASHC1A8K0Z3 465 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 H0YIG0 161 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 TMX2-CTNND1H3BSU7 103 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 DSCR3O14972 297 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 GYG2O15488 501 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 CHST10O43529 356 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 PRKRAO75569 313 aaKnown RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 MT-CO3P00414 261 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 KRT16P08779 473 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 CCL4P13236 92 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 ITGAXP20702 1163 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 BUD31P41223 144 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 PLIN5Q00G26 463 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 ACTN3Q08043 901 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 MAPKAPK3Q16644 382 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms