RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 TMEM200AQ86VY9 491 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 GPR135Q8IZ08 494 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 TMEM151AQ8N4L1 468 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 LRRC8CQ8TDW0 803 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 TRPC4APQ8TEL6 797 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 ZNF483Q8TF39 744 aaPredicted RBP13.69□□□□□ -0.22
USP11-207ENST00000478596 NEIL2Q969S2 332 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 THOC3Q96J01 351 aaKnown RBP13.69□□□□□ -0.22
USP11-207ENST00000478596 PITPNM3Q9BZ71 974 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 NOL11Q9H8H0 719 aaKnown RBP13.69□□□□□ -0.22
USP11-207ENST00000478596 IPPKQ9H8X2 491 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 EML4Q9HC35 981 aaKnown RBP13.69□□□□□ -0.22
USP11-207ENST00000478596 SH2B3Q9UQQ2 575 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 ATRQ13535 2644 aa13.69□□□□□ -0.22
USP11-207ENST00000478596 DYTNA2CJ06 578 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 H3BMH7 237 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 ST6GAL1P15907 406 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 MEF2AQ02078 507 aaPredicted RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 CLCQ05315 142 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 PRDX1Q06830 199 aaKnown RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 LCP2Q13094 533 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 CHIT1Q13231 466 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 RCN2Q14257 317 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 SLBPQ14493 270 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP11-207ENST00000478596 HIST2H2ACQ16777 129 aaPredicted RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 NKAIN1Q4KMZ8 207 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 UNC50Q53HI1 259 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 C1orf189Q5VU69 101 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 HIST2H2AA3Q6FI13 130 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 KIRREL2Q6UWL6 708 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 GPRIN3Q6ZVF9 776 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 Q71RC1 249 aaPredicted RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 KLHDC8AQ8IYD2 350 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 LRRC56Q8IYG6 542 aaPredicted RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 KRT78Q8N1N4 520 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 AFAP1L2Q8N4X5 818 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 OR2A1Q8NGT9 310 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 PHF10Q8WUB8 498 aaKnown RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 HAS2Q92819 552 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 OR4K3Q96R72 315 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 AIF1LQ9BQI0 150 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 GATA5Q9BWX5 397 aaPredicted RBP13.68□□□□□ -0.22
USP11-207ENST00000478596 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 PELI2Q9HAT8 420 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 MID1IP1Q9NPA3 183 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 FIS1Q9Y3D6 152 aa13.68□□□□□ -0.22
USP11-207ENST00000478596 DOCK10Q96BY6 2186 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 TMEM114B3SHH9 223 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 H7BY64 318 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 HAT1O14929 419 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 RASAL1O95294 804 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 SERPIND1P05546 499 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 DHRS4L1P0CG22 281 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 PCNAP12004 261 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 NPPBP16860 134 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 HRH2P25021 359 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 HMOX2P30519 316 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 GRIA3P42263 894 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
USP11-207ENST00000478596 ADAM8P78325 824 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 PHEXP78562 749 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 STX3Q13277 289 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 RBBP5Q15291 538 aaKnown RBP13.67□□□□□ -0.22
USP11-207ENST00000478596 CEBPEQ15744 281 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 CATSPEREQ5SY80 951 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 TMEM198Q66K66 360 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 FIGLAQ6QHK4 219 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 MILR1Q7Z6M3 343 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 AGR3Q8TD06 166 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 CA5BP1Q8WTZ4 195 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 CCT6BQ92526 530 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 RERGQ96A58 199 aaPredicted RBP13.67□□□□□ -0.22
USP11-207ENST00000478596 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
USP11-207ENST00000478596 MAGED4Q96JG8 741 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 PRAP1Q96NZ9 151 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 ALPK1Q96QP1 1244 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 SMR3AQ99954 134 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 ZNF559Q9BR84 538 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 TRMOQ9BU70 441 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 EFCAB11Q9BUY7 163 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 KCNN3Q9UGI6 736 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 HS3ST3B1Q9Y662 390 aa13.67□□□□□ -0.22
USP11-207ENST00000478596 NPHS1O60500 1241 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 CLDN9O95484 217 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 C1GALT1C1LP0DN25 315 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 EZRP15311 586 aaKnown RBP13.66□□□□□ -0.22
USP11-207ENST00000478596 CXCR2P25025 360 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 GRK2P25098 689 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 SERPINB5P36952 375 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 PKNOX1P55347 436 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 LAPTM5Q13571 262 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
USP11-207ENST00000478596 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 TUBB8Q3ZCM7 444 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 ATG9BQ674R7 924 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms