RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ABRAXAS2Q15018 415 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 TUBB8Q3ZCM7 444 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 PPP1R32Q7Z5V6 425 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 PRSS58Q8IYP2 241 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 ADAMTS18Q8TE60 1221 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 ACBD3Q9H3P7 528 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 DDX31Q9H8H2 851 aaKnown RBP25.25■■□□□ 1.63
CCM2-211ENST00000478582 LYRM4Q9HD34 91 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 AHSPQ9NZD4 102 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 KCMF1Q9P0J7 381 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 DAPP1Q9UN19 280 aa25.25■■□□□ 1.63
CCM2-211ENST00000478582 JRKO75564 520 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 HEXBP07686 556 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 PLA2G2AP14555 144 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 ARRB2P32121 409 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 OTX2P32243 289 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 HTR6P50406 440 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 LIM2P55344 173 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 RAB38P57729 211 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 CHI3L2Q15782 390 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 RNF165Q6ZSG1 346 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 METTL4Q8N3J2 472 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 PPP1R14CQ8TAE6 165 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 SHCBP1LQ9BZQ2 653 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 MLXIPLQ9NP71 852 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 VPS29Q9UBQ0 182 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 ADAM29Q9UKF5 820 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 MKL2Q9ULH7 1088 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 SLC12A4Q9UP95 1085 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 CFAP46Q8IYW2 2715 aa25.24■■□□□ 1.63
CCM2-211ENST00000478582 TMEM114B3SHH9 223 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 AZIN1O14977 448 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 CRCPO75575 148 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 SNUPNO95149 360 aaKnown RBP25.23■■□□□ 1.63
CCM2-211ENST00000478582 JAK1P23458 1154 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 GRK2P25098 689 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 CES4AQ5XG92 561 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 ATG14Q6ZNE5 492 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 MRGPREQ86SM8 312 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 PLPP5Q8NEB5 264 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 SORBS1Q9BX66 1292 aaKnown RBP25.23■■□□□ 1.63
CCM2-211ENST00000478582 VN1R1Q9GZP7 353 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 HS3ST3B1Q9Y662 390 aa25.23■■□□□ 1.63
CCM2-211ENST00000478582 CCDC88CQ9P219 2028 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 PSMD12O00232 456 aaPredicted RBP25.22■■□□□ 1.63
CCM2-211ENST00000478582 EFNA3P52797 238 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 TBL3Q12788 808 aaKnown RBP25.22■■□□□ 1.63
CCM2-211ENST00000478582 KANK2Q63ZY3 851 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 TMEM205Q6UW68 189 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 TRIM46Q7Z4K8 759 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 NUDT13Q86X67 352 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 CLYBLQ8N0X4 340 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 HBEGFQ99075 208 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 PAIP2Q9BPZ3 127 aaKnown RBP25.22■■□□□ 1.63
CCM2-211ENST00000478582 MRPL1Q9BYD6 325 aaKnown RBP25.22■■□□□ 1.63
CCM2-211ENST00000478582 ACPTQ9BZG2 426 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 TRAF6Q9Y4K3 522 aa25.22■■□□□ 1.63
CCM2-211ENST00000478582 A0A0A6YYD5 115 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 A0A1W2PQ72 361 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 CYR61O00622 381 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 SOCS6O14544 535 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 ALOX12BO75342 701 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 BGNP21810 368 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 SERPINB3P29508 390 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 RHAGQ02094 409 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 SLAMF1Q13291 335 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 MINDY4Q4G0A6 757 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 CLEC6AQ6EIG7 209 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 MRM1Q6IN84 353 aaKnown RBP25.21■■□□□ 1.63
CCM2-211ENST00000478582 PAGE2Q7Z2X7 111 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 CHTF18Q8WVB6 975 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 VPS50Q96JG6 964 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 MAPKAP1Q9BPZ7 522 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 MAN2B2Q9Y2E5 1009 aa25.21■■□□□ 1.63
CCM2-211ENST00000478582 HEMK1Q9Y5R4 338 aaPredicted RBP25.21■■□□□ 1.63
CCM2-211ENST00000478582 ZNF462Q96JM2 2506 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 FAM227AF5H4B4 570 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 EEDO75530 441 aaKnown RBP25.2■■□□□ 1.62
CCM2-211ENST00000478582 NEFHP12036 1026 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 CHN1P15882 459 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 ABCE1P61221 599 aaKnown RBP25.2■■□□□ 1.62
CCM2-211ENST00000478582 UGT3A2Q3SY77 523 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 MFSD4BQ5TF39 518 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 KIRREL2Q6UWL6 708 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 QSOX2Q6ZRP7 698 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 C9orf43Q8TAL5 461 aaPredicted RBP25.2■■□□□ 1.62
CCM2-211ENST00000478582 MGARPQ8TDB4 240 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 ABHD17AQ96GS6 310 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 RBCK1Q9BYM8 510 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 LYARQ9NX58 379 aaKnown RBP25.2■■□□□ 1.62
CCM2-211ENST00000478582 P4HTMQ9NXG6 502 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 MS4A12Q9NXJ0 267 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.2■■□□□ 1.62
CCM2-211ENST00000478582 DNAJC15Q9Y5T4 150 aa25.2■■□□□ 1.62
CCM2-211ENST00000478582 LOC102723996A0A087X1L8 192 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 PEX12O00623 359 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 ITM2AO43736 263 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 B4GALT2O60909 372 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 CHEK2O96017 543 aa25.19■■□□□ 1.62
CCM2-211ENST00000478582 STX3Q13277 289 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms