RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ADORA2A-AS1P86434 159 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 NAB1Q13506 487 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 TBCCQ15814 346 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 ZNF468Q5VIY5 522 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 TMEM211Q6ICI0 200 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 ARHGAP11AQ6P4F7 1023 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 ABHD17CQ6PCB6 329 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 HSDL2Q6YN16 418 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 RGS9BPQ6ZS82 235 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 CCDC91Q7Z6B0 441 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 PDPRQ8NCN5 879 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 MORN4Q8NDC4 146 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 OR5L2Q8NGL0 311 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 WDR34Q96EX3 536 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 TMEM79Q9BSE2 394 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 TBCDQ9BTW9 1192 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 RAB17Q9H0T7 212 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 LYRM4Q9HD34 91 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 NUDT4Q9NZJ9 180 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 ADGRE2Q9UHX3 823 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 PPT2Q9UMR5 302 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 DAPP1Q9UN19 280 aa13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 MTO1Q9Y2Z2 717 aaKnown RBP13.47□□□□□ -0.25
SMARCE1-209ENST00000478349 A0A0G2JN53 185 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CCDC189A1A4V9 331 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 SYCE1LA8MT33 242 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 C4orf51C9J302 202 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CTNSO60931 367 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 TPOP07202 933 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CD1DP15813 335 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CERS1P27544 350 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 GRNP28799 593 aaKnown RBP13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CRABP2P29373 138 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 PPP2R1BP30154 601 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 LIM2P55344 173 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 PHEXP78562 749 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 RUNX2Q13950 521 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 DOC2AQ14183 400 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 SLMAPQ14BN4 828 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 GRTP1Q5TC63 336 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 GK5Q6ZS86 529 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 C3orf62Q6ZUJ4 267 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CHSY3Q70JA7 882 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 SULF2Q8IWU5 870 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 AMER2Q8N7J2 671 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 ZFP62Q8NB50 900 aaPredicted RBP13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 OR8K3Q8NH51 312 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 FAM57AQ8TBR7 257 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CHTF18Q8WVB6 975 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 ART5Q96L15 291 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 QRFPRQ96P65 431 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 CAB39LQ9H9S4 337 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 NMRAL1Q9HBL8 299 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 MS4A12Q9NXJ0 267 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 OPTCQ9UBM4 332 aa13.46□□□□□ -0.25
SMARCE1-209ENST00000478349 NBPF19A0A087WUL8 3843 aa13.46□□□□□ -0.26
SMARCE1-209ENST00000478349 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM159BA6NKW6 160 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 FANCGO15287 622 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 TP73O15350 636 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CDC40O60508 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 PRF1P14222 555 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 TNNI3P19429 210 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 SSTR1P30872 391 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 MSH2P43246 934 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 SSR2P43308 183 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 PLGLB1Q02325 96 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 TBL3Q12788 808 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CHIT1Q13231 466 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 BIKQ13323 160 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 AP5B1Q2VPB7 878 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 MED27Q6P2C8 311 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 OPN5Q6U736 354 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CLNKQ7Z7G1 428 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 SLC22A16Q86VW1 577 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 PSD4Q8NDX1 1056 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 C16orf52Q8NHV5 167 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 ASB5Q8WWX0 329 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 EXT2Q93063 718 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CMTM7Q96FZ5 175 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 UBXN10Q96LJ8 280 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 CD244Q9BZW8 370 aa13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 TP63Q9H3D4 680 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.45□□□□□ -0.26
SMARCE1-209ENST00000478349 MYOTQ9UBF9 498 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms