RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 RENBPP51606 427 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 KCNJ10P78508 379 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 HMGCS1Q01581 520 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ITKQ08881 620 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PPIGQ13427 754 aaKnown RBP eCLIP10.13□□□□□ -0.794e-7■■□□□ 11.4
ABCF1-205ENST00000475993 GTF2H2Q13888 395 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TOMM20Q15388 145 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 C18orf21Q32NC0 220 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 HSD17B12Q53GQ0 312 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 OVOS1Q6IE37 1185 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PDE12Q6L8Q7 609 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 GTF2H2CQ6P1K8 395 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TMEM107Q6UX40 140 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 MAMDC2Q7Z304 686 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PTOV1Q86YD1 416 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SLC34A3Q8N130 599 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TMEM145Q8NBT3 493 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 C3orf58Q8NDZ4 430 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 COPS5Q92905 334 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 CREB3L1Q96BA8 519 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 WBP1Q96G27 269 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ZNF285Q96NJ3 590 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SMOQ99835 787 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PELOQ9BRX2 385 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 UXTQ9UBK9 157 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 CTSFQ9UBX1 484 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 UBQLN1Q9UMX0 589 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TPST2O60704 377 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 CSO75390 466 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 POP4O95707 220 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 C1QCP02747 245 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 BCKDHAP12694 445 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ANXA8P13928 327 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 S100A3P33764 101 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SF3A2Q15428 464 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SWI5Q1ZZU3 235 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 KLHL22Q53GT1 634 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 CHMP1BQ7LBR1 199 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TRIM46Q7Z4K8 759 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TSEN54Q7Z6J9 526 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 MILR1Q7Z6M3 343 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 RBFAQ8N0V3 343 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 OR10G2Q8NGC3 310 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 OR11H4Q8NGC9 324 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 EEF1AKMT1Q8WVE0 214 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ARL5BQ96KC2 179 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 NIPSNAP1Q9BPW8 284 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ANKRA2Q9H9E1 313 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 FOLH1BQ9HBA9 442 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 LRTM1Q9HBL6 345 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 B3GAT2Q9NPZ5 323 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 TMEM30AQ9NV96 361 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 NUDT4Q9NZJ9 180 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 MLXQ9UH92 298 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 PADI2Q9Y2J8 665 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 MRPL42Q9Y6G3 142 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 COL4A4P53420 1690 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 LOC102723532A0A0G2JNH3 316 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 C17orf113A0A1B0GUU1 675 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 WASH4PA8MWX3 477 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 EIF1BO60739 113 aaKnown RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 CCNB2O95067 398 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 ACSM4P0C7M7 580 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 ZNF806P0C7X5 589 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 HPGDP15428 266 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 PNPLA4P41247 253 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 EIF1P41567 113 aaKnown RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 TAF6P49848 677 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 BTG1P62324 171 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 RIPPLY1Q0D2K3 151 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 RPA4Q13156 261 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 EIF4EBP2Q13542 120 aaPredicted RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 FCN2Q15485 313 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 SPHARQ15513 63 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 SLC16A13Q7RTY0 426 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 MTMR14Q8NCE2 650 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 CHST13Q8NET6 341 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 LINGO1Q96FE5 620 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 RBP7Q96R05 134 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 TMEM43Q9BTV4 400 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 IPPKQ9H8X2 491 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 AGO3Q9H9G7 860 aaKnown RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 TXNL4BQ9NX01 149 aaKnown RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 PHF11Q9UIL8 331 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 ERVK-19Q9WJR5 959 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 DNMT3AQ9Y6K1 912 aaPredicted RBP10.12□□□□□ -0.79
ABCF1-205ENST00000475993 MCM3APO60318 1980 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 TNFRSF11BO00300 401 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 AP2A2O94973 939 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 MPC2O95563 127 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 PTAFRP25105 342 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 SMSP52788 366 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 CRYBA2P53672 197 aa10.12□□□□□ -0.79
ABCF1-205ENST00000475993 CLDN8P56748 225 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms