RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PPP1CAP62136 330 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ELF3P78545 371 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 HSD11B2P80365 405 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 UGT8Q16880 541 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 PAGE3Q5JUK9 113 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 NKAIN2Q5VXU1 208 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 OR4F3Q6IEY1 312 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 SPRED1Q7Z699 444 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 UBE3DQ7Z6J8 389 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 TRIML2Q8N7C3 387 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ACOT4Q8N9L9 421 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 TTC29Q8NA56 475 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 FAM13CQ8NE31 585 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 TNIP2Q8NFZ5 429 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 OR7A2PQ8NGA2 310 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 OR8J3Q8NGG0 315 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 OR8K5Q8NH50 307 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ZCCHC10Q8TBK6 192 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 UTP15Q8TED0 518 aaKnown RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 GTF2H4Q92759 462 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 TM4SF18Q96CE8 201 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 COQ8BQ96D53 544 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF764Q96H86 408 aaPredicted RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 FCRL4Q96PJ5 515 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 PANX1Q96RD7 426 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 SORBS1Q9BX66 1292 aaKnown RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 KLHL31Q9H511 634 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 FANCEQ9HB96 536 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 PRDM7Q9NQW5 492 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 EHD3Q9NZN3 535 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 VPS4AQ9UN37 437 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 MAN2B2Q9Y2E5 1009 aa11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ASCC3Q8N3C0 2202 aaKnown RBP11.62□□□□□ -0.55
MRPL55-227ENST00000475832 ADAMTS9Q9P2N4 1935 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 LOC105369274A0A096LPK9 316 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 A0A0G2JN53 185 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 LOC102723532A0A0G2JNH3 316 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 C1orf226A1L170 272 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 EME2A4GXA9 379 aaPredicted RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 RNASET2O00584 256 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 B4GAT1O43505 415 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PDE5AO76074 875 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SCELO95171 688 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 C9P02748 559 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 STATHP02808 62 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 LAMP1P11279 417 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PPIBP23284 216 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 CD1CP29017 333 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SLC7A2P52569 658 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 GFERP55789 205 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 EEFSECP57772 596 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 HYAL2Q12891 473 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 BNIP2Q12982 314 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SQSTM1Q13501 440 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PDE7AQ13946 482 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 CAPRIN1Q14444 709 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SOWAHCQ53LP3 525 aaPredicted RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 GARNL3Q5VVW2 1013 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 FRMPD2BQ6IN97 320 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 TMEM71Q6P5X7 295 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PGM2L1Q6PCE3 622 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 RIPOR1Q6ZS17 1223 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 USP53Q70EK8 1073 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PRSS42Q7Z5A4 293 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PIP4P1Q86T03 277 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 TICAM1Q8IUC6 712 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SAMD14Q8IZD0 417 aaPredicted RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 OR4N4Q8N0Y3 316 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 DNAJC22Q8N4W6 341 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 EFCAB3Q8N7B9 438 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 KCT2Q8NC54 265 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 ZFP28Q8NHY6 868 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 DNAJB14Q8TBM8 379 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 JADE3Q92613 823 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 UTP4Q969X6 686 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SLC45A3Q96JT2 553 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 PPM1MQ96MI6 270 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 TEFMQ96QE5 360 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 CGREF1Q99674 301 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 MACROD1Q9BQ69 325 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 ECSITQ9BQ95 431 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 GPATCH1Q9BRR8 931 aaKnown RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 ZNF717Q9BY31 904 aaPredicted RBP11.61□□□□□ -0.55
MRPL55-227ENST00000475832 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SYNDIG1Q9H7V2 258 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 ANKHQ9HCJ1 492 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 TMEM181Q9P2C4 612 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 CORO2BQ9UQ03 480 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 SLC22A7Q9Y694 548 aa11.61□□□□□ -0.55
MRPL55-227ENST00000475832 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
MRPL55-227ENST00000475832 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 A0A1W2PRB8 838 aa11.6□□□□□ -0.55
MRPL55-227ENST00000475832 PDPK1O15530 556 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms