RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DGAT2L6Q6ZPD8 337 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 C3orf62Q6ZUJ4 267 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 FRA10AC1Q70Z53 315 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 ADAMTSL2Q86TH1 951 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 GPSM1Q86YR5 675 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 GHDCQ8N2G8 530 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RNF175Q8N4F7 328 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RPRMLQ8N4K4 120 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 FAM47BQ8NA70 645 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SPATA4Q8NEY3 305 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 C16orf52Q8NHV5 167 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PYROXD1Q8WU10 500 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CCT6BQ92526 530 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 KIAA1191Q96A73 305 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 ANKRD9Q96BM1 317 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PTCD3Q96EY7 689 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SEC16BQ96JE7 1060 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MAGED4Q96JG8 741 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 FAR2Q96K12 515 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RUNDC3BQ96NL0 473 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 GPR22Q99680 433 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 RBBP8Q99708 897 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 NAPGQ99747 312 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MAPKAP1Q9BPZ7 522 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CD244Q9BZW8 370 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 DPH5Q9H2P9 285 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 EHD1Q9H4M9 534 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SAYSD1Q9NPB0 183 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CHST11Q9NPF2 352 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PRTFDC1Q9NRG1 225 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 PLSCR2Q9NRY7 297 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 IGSF5Q9NSI5 407 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 DNAJC11Q9NVH1 559 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 GPRC5BQ9NZH0 403 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 MYOTQ9UBF9 498 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 FBXW2Q9UKT8 454 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 CELSR1Q9NYQ6 3014 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 SVILO95425 2214 aa6.53□□□□□ -1.36
HDAC3-207ENST00000475549 DIDO1Q9BTC0 2240 aaKnown RBP6.53□□□□□ -1.36
HDAC3-207ENST00000475549 E9PLN8 166 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 KLRC4-KLRK1H3BQV0 150 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 HRKO00198 91 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 WWP2O00308 870 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SAP18O00422 153 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CLDN4O14493 209 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 B3GALT2O43825 422 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 LDB3O75112 727 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SH3BGRLO75368 114 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ZFAND5O76080 213 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CLDN14O95500 239 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ETHE1O95571 254 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SLC35E2BP0CK96 405 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ABOP16442 354 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 TFEBP19484 476 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ELAVL4P26378 380 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CASP2P42575 452 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 MTTPP55157 894 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CASP6P55212 293 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 RAB10P61026 200 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ID2Q02363 134 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 PCDH1Q08174 1060 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SLC13A2Q13183 592 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CHIT1Q13231 466 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 EFTUD2Q15029 972 aaKnown RBP eCLIP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 PDK4Q16654 411 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF750Q32MQ0 723 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 KBTBD12Q3ZCT8 623 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 UBAP2Q5T6F2 1119 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ZDHHC24Q6UX98 284 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CMC1Q7Z7K0 106 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 OR4N5Q8IXE1 308 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF595Q8IYB9 648 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 KRT78Q8N1N4 520 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 C17orf53Q8N3J3 647 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 TMEM156Q8N614 296 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ACOT4Q8N9L9 421 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 PDPRQ8NCN5 879 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ARMC2Q8NEN0 867 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 TTLQ8NG68 377 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 FAM57AQ8TBR7 257 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 MTFMTQ96DP5 389 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 VMP1Q96GC9 406 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 LURAP1Q96LR2 239 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 RASL10BQ96S79 203 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SERINC2Q96SA4 455 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ATOH8Q96SQ7 321 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CPNE1Q99829 537 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 TREX2Q9BQ50 279 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 VKORC1Q9BQB6 163 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 SORBS1Q9BX66 1292 aaKnown RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 CAPS2Q9BXY5 557 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 MS4A8Q9BY19 250 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ALOXE3Q9BYJ1 711 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 PITHD1Q9GZP4 211 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 DEFB127Q9H1M4 99 aa6.52□□□□□ -1.37
HDAC3-207ENST00000475549 ALG9Q9H6U8 611 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms