RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 B3GALT2O43825 422 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SH3BP5O60239 455 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 C6orf47O95873 294 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SYPP08247 313 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SMIM10L1P0DMW3 83 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 EFNA1P20827 205 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 PPIBP23284 216 aaKnown RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 ERFP50548 548 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 ATXN3P54252 364 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 AP2B1P63010 937 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 DEFB110Q30KQ9 67 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 TRIM61Q5EBN2 209 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 NDUFAF5Q5TEU4 345 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SLC23A3Q6PIS1 610 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF621Q6ZSS3 439 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 DHFR2Q86XF0 187 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 DNAJC22Q8N4W6 341 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 GOT1L1Q8NHS2 421 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 CCDC74AQ96AQ1 378 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SMIM10Q96HG1 83 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 RSRC1Q96IZ7 334 aaKnown RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 LRGUKQ96M69 825 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 FAM60AQ9NP50 221 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SOHLH2Q9NX45 425 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF282Q9UDV7 671 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 PHF11Q9UIL8 331 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 ASB4Q9Y574 426 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 SNX13Q9Y5W8 968 aa13.03□□□□□ -0.32
TRAF4-210ENST00000475329 MN1Q10571 1320 aaPredicted RBP13.03□□□□□ -0.32
TRAF4-210ENST00000475329 BDP1A6H8Y1 2624 aa13.02□□□□□ -0.32
TRAF4-210ENST00000475329 A0A1W2PRB8 838 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 C1orf226A1L170 272 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 FAM220BPB1ANY3 271 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 CLIC1O00299 241 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ARPC2O15144 300 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 KIF1CO43896 1103 aaKnown RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ZBTB11O95625 1053 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 AIFM1O95831 613 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 C8BP07358 591 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 NR2F6P10588 404 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PNLIPP16233 465 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ALOX12P18054 663 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PRSS53Q2L4Q9 553 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 MPEG1Q2M385 716 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 LCN8Q6JVE9 175 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 SPRED1Q7Z699 444 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 SPATA24Q86W54 205 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PTRH1Q86Y79 214 aaKnown RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PLXDC1Q8IUK5 500 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 TRIML2Q8N7C3 387 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 Q8N9G6 341 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 FAM181AQ8N9Y4 354 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 OR2T12Q8NG77 320 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 AURKBQ96GD4 344 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 LOXL4Q96JB6 756 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 CHRNA10Q9GZZ6 450 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 S100A14Q9HCY8 104 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PDE7BQ9NP56 450 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 TAS2R7Q9NYW3 318 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 NKX1-2Q9UD57 310 aaPredicted RBP13.02□□□□□ -0.33
TRAF4-210ENST00000475329 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 MAGEL2Q9UJ55 1249 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 FBXW2Q9UKT8 454 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 ANGPTL2Q9UKU9 493 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 CORO2BQ9UQ03 480 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 RP1P56715 2156 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 MUC3AQ02505 3323 aa13.02□□□□□ -0.33
TRAF4-210ENST00000475329 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 A0A1W2PR48 441 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 B4GAT1O43505 415 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 SIGLEC6O43699 453 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 SRPX2O60687 465 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 C9P02748 559 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ABCB1P08183 1280 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 MYF5P13349 255 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ENGP17813 658 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 IL1RNP18510 177 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ATP6V1B2P21281 511 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 NTSP30990 170 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 FRKP42685 505 aaPredicted RBP13.01□□□□□ -0.33
TRAF4-210ENST00000475329 OR4D2P58180 307 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 HBA1P69905 142 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 TNFRSF17Q02223 184 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 ABHD18Q0P651 414 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 GAB1Q13480 694 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 MAP7Q14244 749 aa13.01□□□□□ -0.33
TRAF4-210ENST00000475329 FXNQ16595 210 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms