RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 PPP2R1BP30154 601 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 HNRNPH1P31943 449 aaKnown RBP16.54■□□□□ 0.24
PCGF3-209ENST00000475288 ZFP36L2P47974 494 aaKnown RBP16.54■□□□□ 0.24
PCGF3-209ENST00000475288 CCZ1BP86790 482 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 CCZ1P86791 482 aaPredicted RBP16.54■□□□□ 0.24
PCGF3-209ENST00000475288 PLGLB1Q02325 96 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 FOLH1Q04609 750 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 SLC13A2Q13183 592 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 RCN2Q14257 317 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 XKR6Q5GH73 641 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 HSDL2Q6YN16 418 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 SLCO4C1Q6ZQN7 724 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 RTL4Q6ZR62 310 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 TRILQ7L0X0 811 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 FAM109AQ8N4B1 249 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 NKAPQ8N5F7 415 aaKnown RBP16.54■□□□□ 0.24
PCGF3-209ENST00000475288 TMEM52Q8NDY8 209 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 C7orf57Q8NEG2 295 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 OR2L5Q8NG80 312 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 SERINC2Q96SA4 455 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 FAM173AQ9BQD7 235 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 TTYH2Q9BSA4 534 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 PNPLA3Q9NST1 481 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
PCGF3-209ENST00000475288 NPIPA2E9PIF3 369 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 NPIPA3F8WFD2 350 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 CYR61O00622 381 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 DNALI1O14645 258 aaPredicted RBP16.53■□□□□ 0.24
PCGF3-209ENST00000475288 ERI3O43414 337 aaKnown RBP16.53■□□□□ 0.24
PCGF3-209ENST00000475288 CTNSO60931 367 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 WDR1O75083 606 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 ZWINTO95229 277 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 CNR1P21554 472 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 SOX3P41225 446 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 SLC6A12P48065 614 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 HNRNPFP52597 415 aaKnown RBP16.53■□□□□ 0.24
PCGF3-209ENST00000475288 MYBPHQ13203 477 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 FRG1Q14331 258 aaKnown RBP16.53■□□□□ 0.24
PCGF3-209ENST00000475288 EFTUD2Q15029 972 aaKnown RBP eCLIP16.53■□□□□ 0.242e-6■■□□□ 13.2
PCGF3-209ENST00000475288 SLC25A35Q3KQZ1 300 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 MSS51Q4VC12 460 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 IL20RBQ6UXL0 311 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 B3GNT6Q6ZMB0 384 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 IGDCC3Q8IVU1 814 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 OR14A16Q8NHC5 309 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 CAPS2Q9BXY5 557 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 RYDENQ9NUL5 291 aaKnown RBP16.53■□□□□ 0.24
PCGF3-209ENST00000475288 GPRC5BQ9NZH0 403 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 VTI1BQ9UEU0 232 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 DAPP1Q9UN19 280 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 L3MBTL1Q9Y468 752 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 FAM215AQ9Y5M1 114 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 CLCA3PQ9Y6N3 262 aa16.53■□□□□ 0.24
PCGF3-209ENST00000475288 MAP1AP78559 2803 aaPredicted RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 DNAJC13O75165 2243 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 GOLGA6L10A0A0M3HER8 536 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 FAM166BA8MTA8 275 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 FAM47E-STBD1D6RA91 191 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 GLI4P10075 376 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 CD99P14209 185 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 SAT1P21673 171 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 PEX19P40855 299 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 NR0B1P51843 470 aaKnown RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 HK2P52789 917 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 PGGT1BP53609 377 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 IST1P53990 364 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 FOXO1Q12778 655 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 BMPR2Q13873 1038 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 SLBPQ14493 270 aaKnown RBP eCLIP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 PPP1R7Q15435 360 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 STEAP4Q687X5 459 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 RTL6Q6ICC9 239 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 C16orf47Q6ZP98 133 aaPredicted RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 ADAMTSL2Q86TH1 951 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 KRT78Q8N1N4 520 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 CHDHQ8NE62 594 aaPredicted RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 ACTRT1Q8TDG2 376 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 SLCO2A1Q92959 643 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 KIAA1191Q96A73 305 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 LRRC39Q96DD0 335 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 REXO4Q9GZR2 422 aaKnown RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 PPANQ9NQ55 473 aaKnown RBP16.52■□□□□ 0.24
PCGF3-209ENST00000475288 SLC17A6Q9P2U8 582 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 PCDHGB3Q9Y5G1 929 aa16.52■□□□□ 0.24
PCGF3-209ENST00000475288 A0A0G2JMM0 328 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 A0A0G2JNJ9 132 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 A0A1W2PPB8 328 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 A0A1W2PRS3 328 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 KIR3DP1A8MWS1 328 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 CDC7O00311 574 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 HCN1O60741 890 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 BANF1O75531 89 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 WDR47O94967 919 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 TBX6O95947 436 aaPredicted RBP16.51■□□□□ 0.23
PCGF3-209ENST00000475288 MTTPP55157 894 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 LIM2P55344 173 aa16.51■□□□□ 0.23
PCGF3-209ENST00000475288 ILF2Q12905 390 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms